SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0045640
Gene Symbol: GRB2
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.75325959G>A COSM984354 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4289 gcggCACAATGgggc GCAUUGUG m7b Created HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-550b-2-5p gcGGCACAatggggc AUGUGCCU m6b Created HHRBC_5829_BC3-2of3-SCL_1082

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75325955G>T COSM195348 TCGA-AA-3543-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3189-5p cacgATGGGGCcttt UGCCCCAU m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-4717-5p cacgatGTGGCCTtt UAGGCCAC m7b Created HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-4753-5p cacgatgTGGCCTTt CAAGGCCA m7b Created HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-874-5p cacgaTGGGGCCttt CGGCCCCA m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75325953G>A COSM984353 TCGA-D1-A15X-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3189-5p cgATGGGGCctttct UGCCCCAU m7b (m7b->m6b) HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-6730-5p cgatgggACCTTTCt AGAAAGGU m7b Created HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-6768-3p cgatggGGCCTTTct CAAAGGCC m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-874-5p cgaTGGGGCCtttct CGGCCCCA m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75325922C>T COSM1195692 H1155 [lung][NS][carcinoma][large_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1915-3p agcgctCCTGGGGac CCCCAGGG m7a Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-2355-5p agcgctcCTGGGGAc AUCCCCAG m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-335-5p agcGCTCTTGgggac UCAAGAGC m7b Created HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-665 agcgCTCCTGGggac ACCAGGAG m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-6840-3p agcgcTCCTGGGgac GCCCAGGA m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75325914T>G COSM161385 PD4937a [breast][NS][carcinoma][HER-positive_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-3p tggggaCGTCTCCct UGGAGACG m7b Created HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-4434 tggggaCTTCTCCct AGGAGAAG m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-4516 tggggaCTTCTCCCt GGGAGAAG m8a Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-5703 tggggaCTTCTCCct AGGAGAAG m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082
hsa-miR-6878-5p tggggacTTCTCCCt AGGGAGAA m7b Disrupted HHRBC_5829_BC3-2of3-SCL_1082

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75321747C>A COSM175492 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p ttcaATTCTTTGaat CAAAGAAU m8a Disrupted HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-3671 ttcaatTATTTGAat AUCAAAUA m7b Created HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-5692a ttcaATTATTTGaat CAAAUAAU m8a Created HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-607 ttcaattATTTGAAt GUUCAAAU m7b Created HHRBL_6705_BCBL1-2of3-SCL_7762

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75321737G>C COSM70974 TCGA-24-2024-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p tgaatgaGCTGGTGg UCACCAGC m7b Disrupted HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-4267 tgaatGAGCTGGtgg UCCAGCUC m7b Disrupted HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-4733-3p tgaatgaCCTGGTGg CCACCAGG m7b Created HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-6758-3p tGAATGAGctggtgg ACUCAUUC m7b Disrupted HHRBL_6705_BCBL1-2of3-SCL_7762

Mutation Mutation ID Sample Name Cancer Type
chr17:g.75321713A>G COSM1610755 HCC60 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1277-3p gaTCTACGTctgtct UACGUAGA m7b (m6b->m7b) HHFKP_61299_cluster-10562_15_9
hsa-miR-3668 gaTCTACATctgtct AAUGUAGA m7b (m7b->m6b) HHFKP_61299_cluster-10562_15_9
hsa-miR-5683 gatctaCATCTGTct UACAGAUG m7b Disrupted HHFKP_61299_cluster-10562_15_9
hsa-miR-1277-3p gaTCTACGTctgtct UACGUAGA m7b (m6b->m7b) HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-3668 gaTCTACATctgtct AAUGUAGA m7b (m7b->m6b) HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-5683 gatctaCATCTGTct UACAGAUG m7b Disrupted HHRBL_6705_BCBL1-2of3-SCL_7762
hsa-miR-1277-3p gaTCTACGTctgtct UACGUAGA m7b (m6b->m7b) HPRO6_35442_G41897.1_73317800
hsa-miR-3668 gaTCTACATctgtct AAUGUAGA m7b (m7b->m6b) HPRO6_35442_G41897.1_73317800
hsa-miR-5683 gatctaCATCTGTct UACAGAUG m7b Disrupted HPRO6_35442_G41897.1_73317800

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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