SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0024728
Gene Symbol: GRAMD1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.123610259G>A COSM261181 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3677-3p caCCCACGAcgtgcc CUCGUGGG m7b (m7b->m6b) HHFKP_30119_cluster-3908_80_221
hsa-miR-4265 caCCCACAacgtgcc CUGUGGGC m6b Created HHFKP_30119_cluster-3908_80_221
hsa-miR-4296 caCCCACAacgtgcc AUGUGGGC m6b Created HHFKP_30119_cluster-3908_80_221
hsa-miR-4322 caCCCACAacgtgcc CUGUGGGC m6b Created HHFKP_30119_cluster-3908_80_221
hsa-miR-4440 cacCCACGACgtgcc UGUCGUGG m7b Disrupted HHFKP_30119_cluster-3908_80_221
hsa-miR-6748-5p CACCCACAacgtgcc UGUGGGUG m8a Created HHFKP_30119_cluster-3908_80_221
hsa-miR-6759-5p cACCCACAAcgtgcc UUGUGGGU m8a (m7a->m8a) HHFKP_30119_cluster-3908_80_221
hsa-miR-6793-5p cACCCACAacgtgcc UGUGGGUU m7a Created HHFKP_30119_cluster-3908_80_221

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123610232G>A COSM338137 LUAD-D01751 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-379-3p atGTTACATgataga UAUGUAAC m7b (m6b->m7b) HHFKP_30119_cluster-3908_80_221
hsa-miR-411-3p atGTTACATgataga UAUGUAAC m7b (m6b->m7b) HHFKP_30119_cluster-3908_80_221
hsa-miR-6516-3p atgtTACATGATaga AUCAUGUA m8a Created HHFKP_30119_cluster-3908_80_221
hsa-miR-96-3p atgttACATGATaga AAUCAUGU m7b Created HHFKP_30119_cluster-3908_80_221

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123608505C>T COSN9457373 PTC-28C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3138 aaccaTGTCCACgag UGUGGACA m7b Created HHFCT_31413_cluster-3908_143_29
hsa-miR-3622b-5p aaCCATGCCcacgag AGGCAUGG m7b (m7b->m6b) HHFCT_31413_cluster-3908_143_29
hsa-miR-3677-3p aaccatgCCCACGAg CUCGUGGG m7b Disrupted HHFCT_31413_cluster-3908_143_29
hsa-miR-3945 aaccATGCCCacgag AGGGCAUA m6b Disrupted HHFCT_31413_cluster-3908_143_29
hsa-miR-4253 aacCATGCCCacgag AGGGCAUG m7b Disrupted HHFCT_31413_cluster-3908_143_29
hsa-miR-6862-5p aacCATGCCCacgag CGGGCAUG m7b Disrupted HHFCT_31413_cluster-3908_143_29

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123608502A>T COSN9457372 PTC-28C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p ataaaCCATGCCcac AGGCAUGG m7b Disrupted HHFCT_31413_cluster-3908_143_29
hsa-miR-3945 ataaaccATGCCCac AGGGCAUA m6b Disrupted HHFCT_31413_cluster-3908_143_29
hsa-miR-4253 ataaacCATGCCCac AGGGCAUG m7b Disrupted HHFCT_31413_cluster-3908_143_29
hsa-miR-6809-5p ataaaCCTTGCCcac UGGCAAGG m7b Created HHFCT_31413_cluster-3908_143_29
hsa-miR-6862-5p ataaacCATGCCCac CGGGCAUG m7b Disrupted HHFCT_31413_cluster-3908_143_29

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123600549G>A COSM4450471 CSCC-40-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4724-3p tgaaAAGGTAagtac GUACCUUC m6b Disrupted HHFCT_31412_cluster-3908_142_595
hsa-miR-6782-3p tgaAAAGGTaagtac CACCUUUG m6b Disrupted HHFCT_31412_cluster-3908_142_595
hsa-miR-4724-3p tgaaAAGGTAagtac GUACCUUC m6b Disrupted HHFCT_31412_cluster-3908_142_595
hsa-miR-6782-3p tgaAAAGGTaagtac CACCUUUG m6b Disrupted HHFCT_31412_cluster-3908_142_595

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123598543A>T COSN2465986
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1290 tgccaAAAATCCcaa UGGAUUUU m7b Disrupted HPKTA_12545_G13550.1_123469258
hsa-miR-3145-3p tgccAAATATCccaa AGAUAUUU m7b Created HPKTA_12545_G13550.1_123469258
hsa-miR-3201 tgccaaATATCCCaa GGGAUAUG m7a Created HPKTA_12545_G13550.1_123469258
hsa-miR-5002-5p tgCCAAATatcccaa AAUUUGGU m6b Created HPKTA_12545_G13550.1_123469258
hsa-miR-5089-5p tgccaaaAATCCCAa GUGGGAUU m7b Disrupted HPKTA_12545_G13550.1_123469258
hsa-miR-1290 tgccaAAAATCCcaa UGGAUUUU m7b Disrupted HPRO6_16960_G19860.1_123469258
hsa-miR-3145-3p tgccAAATATCccaa AGAUAUUU m7b Created HPRO6_16960_G19860.1_123469258
hsa-miR-3201 tgccaaATATCCCaa GGGAUAUG m7a Created HPRO6_16960_G19860.1_123469258
hsa-miR-5002-5p tgCCAAATatcccaa AAUUUGGU m6b Created HPRO6_16960_G19860.1_123469258
hsa-miR-5089-5p tgccaaaAATCCCAa GUGGGAUU m7b Disrupted HPRO6_16960_G19860.1_123469258
hsa-miR-1290 tgccaAAAATCCcaa UGGAUUUU m7b Disrupted HPTK1_6554_G7769.1_123469258
hsa-miR-3145-3p tgccAAATATCccaa AGAUAUUU m7b Created HPTK1_6554_G7769.1_123469258
hsa-miR-3201 tgccaaATATCCCaa GGGAUAUG m7a Created HPTK1_6554_G7769.1_123469258
hsa-miR-5002-5p tgCCAAATatcccaa AAUUUGGU m6b Created HPTK1_6554_G7769.1_123469258
hsa-miR-5089-5p tgccaaaAATCCCAa GUGGGAUU m7b Disrupted HPTK1_6554_G7769.1_123469258

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123598250C>G COSN8641030 1428_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-122-3p tcATGGCGTaaatat AACGCCAU m7b (m6b->m7b) HPCB1_8213_G10343.1_123468950
hsa-miR-1295a tcatGGCCTAAatat UUAGGCCG m7a Disrupted HPCB1_8213_G10343.1_123468950
hsa-miR-15a-3p tcATGGCCTaaatat CAGGCCAU m7b (m7b->m6b) HPCB1_8213_G10343.1_123468950
hsa-miR-4529-5p tcATGGCCTaaatat AGGCCAUC m7a (m7a->m6a) HPCB1_8213_G10343.1_123468950
hsa-miR-4699-3p tcatggcGTAAATat AAUUUACU m6b Created HPCB1_8213_G10343.1_123468950
hsa-miR-4717-5p tcaTGGCCTAaatat UAGGCCAC m7a Disrupted HPCB1_8213_G10343.1_123468950
hsa-miR-5704 tcaTGGCCTAAatat UUAGGCCA m8a Disrupted HPCB1_8213_G10343.1_123468950
hsa-miR-122-3p tcATGGCGTaaatat AACGCCAU m7b (m6b->m7b) HPCB3_4452_G6161.1_123468952
hsa-miR-1295a tcatGGCCTAAatat UUAGGCCG m7a Disrupted HPCB3_4452_G6161.1_123468952
hsa-miR-15a-3p tcATGGCCTaaatat CAGGCCAU m7b (m7b->m6b) HPCB3_4452_G6161.1_123468952
hsa-miR-4529-5p tcATGGCCTaaatat AGGCCAUC m7a (m7a->m6a) HPCB3_4452_G6161.1_123468952
hsa-miR-4699-3p tcatggcGTAAATat AAUUUACU m6b Created HPCB3_4452_G6161.1_123468952
hsa-miR-4717-5p tcaTGGCCTAaatat UAGGCCAC m7a Disrupted HPCB3_4452_G6161.1_123468952
hsa-miR-5704 tcaTGGCCTAAatat UUAGGCCA m8a Disrupted HPCB3_4452_G6161.1_123468952
hsa-miR-122-3p tcATGGCGTaaatat AACGCCAU m7b (m6b->m7b) HPRO6_16959_G19859.1_123468951
hsa-miR-1295a tcatGGCCTAAatat UUAGGCCG m7a Disrupted HPRO6_16959_G19859.1_123468951
hsa-miR-15a-3p tcATGGCCTaaatat CAGGCCAU m7b (m7b->m6b) HPRO6_16959_G19859.1_123468951
hsa-miR-4529-5p tcATGGCCTaaatat AGGCCAUC m7a (m7a->m6a) HPRO6_16959_G19859.1_123468951
hsa-miR-4699-3p tcatggcGTAAATat AAUUUACU m6b Created HPRO6_16959_G19859.1_123468951
hsa-miR-4717-5p tcaTGGCCTAaatat UAGGCCAC m7a Disrupted HPRO6_16959_G19859.1_123468951
hsa-miR-5704 tcaTGGCCTAAatat UUAGGCCA m8a Disrupted HPRO6_16959_G19859.1_123468951
hsa-miR-122-3p tcATGGCGTaaatat AACGCCAU m7b (m6b->m7b) HPSLC_4000_G4742.1_123468953
hsa-miR-1295a tcatGGCCTAAatat UUAGGCCG m7a Disrupted HPSLC_4000_G4742.1_123468953
hsa-miR-15a-3p tcATGGCCTaaatat CAGGCCAU m7b (m7b->m6b) HPSLC_4000_G4742.1_123468953
hsa-miR-4529-5p tcATGGCCTaaatat AGGCCAUC m7a (m7a->m6a) HPSLC_4000_G4742.1_123468953
hsa-miR-4699-3p tcatggcGTAAATat AAUUUACU m6b Created HPSLC_4000_G4742.1_123468953
hsa-miR-4717-5p tcaTGGCCTAaatat UAGGCCAC m7a Disrupted HPSLC_4000_G4742.1_123468953
hsa-miR-5704 tcaTGGCCTAAatat UUAGGCCA m8a Disrupted HPSLC_4000_G4742.1_123468953

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123596022C>A COSM4498672 CSCC-10-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-130b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-148a-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-148b-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-152-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-19a-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-19b-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-301a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-301b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-3666 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-4277 aagtttGAACTGatt GCAGUUCU m6b Created HHFCT_31411_cluster-3908_141_58
hsa-miR-4295 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-454-3p aagtTTGCACTgatt UAGUGCAA m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-5000-5p aagttTGAACTGatt CAGUUCAG m7a Created HHFCT_31411_cluster-3908_141_58
hsa-miR-5094 aagtttgCACTGATt AAUCAGUG m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-6715b-3p aaGTTTGAactgatt CUCAAACC m6b Created HHFCT_31411_cluster-3908_141_58
hsa-miR-130a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-130b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-148a-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-148b-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-152-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-19a-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-19b-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-301a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-301b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-3666 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-4277 aagtttGAACTGatt GCAGUUCU m6b Created HPRT3_5010_G6578.1_123466727
hsa-miR-4295 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-454-3p aagtTTGCACTgatt UAGUGCAA m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-5000-5p aagttTGAACTGatt CAGUUCAG m7a Created HPRT3_5010_G6578.1_123466727
hsa-miR-5094 aagtttgCACTGATt AAUCAGUG m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-6715b-3p aaGTTTGAactgatt CUCAAACC m6b Created HPRT3_5010_G6578.1_123466727
hsa-miR-130a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-130b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-148a-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-148b-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-152-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-19a-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-19b-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-301a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-301b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-3666 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-4277 aagtttGAACTGatt GCAGUUCU m6b Created HHFCT_31411_cluster-3908_141_58
hsa-miR-4295 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-454-3p aagtTTGCACTgatt UAGUGCAA m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-5000-5p aagttTGAACTGatt CAGUUCAG m7a Created HHFCT_31411_cluster-3908_141_58
hsa-miR-5094 aagtttgCACTGATt AAUCAGUG m7b Disrupted HHFCT_31411_cluster-3908_141_58
hsa-miR-6715b-3p aaGTTTGAactgatt CUCAAACC m6b Created HHFCT_31411_cluster-3908_141_58
hsa-miR-130a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-130b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-148a-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-148b-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-152-3p aagttTGCACTGAtt UCAGUGCA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-19a-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-19b-3p aagTTTGCACtgatt UGUGCAAA m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-301a-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-301b-3p aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-3666 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-4277 aagtttGAACTGatt GCAGUUCU m6b Created HPRT3_5010_G6578.1_123466727
hsa-miR-4295 aagtTTGCACTGatt CAGUGCAA m8a Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-454-3p aagtTTGCACTgatt UAGUGCAA m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-5000-5p aagttTGAACTGatt CAGUUCAG m7a Created HPRT3_5010_G6578.1_123466727
hsa-miR-5094 aagtttgCACTGATt AAUCAGUG m7b Disrupted HPRT3_5010_G6578.1_123466727
hsa-miR-6715b-3p aaGTTTGAactgatt CUCAAACC m6b Created HPRT3_5010_G6578.1_123466727

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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