SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0024725
Gene Symbol: GRAMD1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.123593788G>T COSN10079741 C0074T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1306-5p ccctGGAGGTGtccc CCACCUCC m7b Disrupted HHFCT_31407_cluster-3908_137_28
hsa-miR-642a-3p ccctggATGTGTCcc AGACACAU m7b Created HHFCT_31407_cluster-3908_137_28
hsa-miR-642b-3p ccctggATGTGTCcc AGACACAU m7b Created HHFCT_31407_cluster-3908_137_28
hsa-miR-1306-5p ccctGGAGGTGtccc CCACCUCC m7b Disrupted HHFKP_30116_cluster-3908_77_13
hsa-miR-642a-3p ccctggATGTGTCcc AGACACAU m7b Created HHFKP_30116_cluster-3908_77_13
hsa-miR-642b-3p ccctggATGTGTCcc AGACACAU m7b Created HHFKP_30116_cluster-3908_77_13

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123590802G>A COSN6989950 8016486 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p attaaaCATGCCact AGGCAUGG m6b Created HHFCT_31386_cluster-3908_107_108
hsa-miR-564 attaaaCGTGCCact AGGCACGG m6b Disrupted HHFCT_31386_cluster-3908_107_108
hsa-miR-891a-3p attaaacGTGCCACt AGUGGCAC m7b Disrupted HHFCT_31386_cluster-3908_107_108
hsa-miR-3622b-5p attaaaCATGCCact AGGCAUGG m6b Created HHFKP_30105_cluster-3908_65_28
hsa-miR-564 attaaaCGTGCCact AGGCACGG m6b Disrupted HHFKP_30105_cluster-3908_65_28
hsa-miR-891a-3p attaaacGTGCCACt AGUGGCAC m7b Disrupted HHFKP_30105_cluster-3908_65_28

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123590059C>T COSN5897678 RK111_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3646 TTCATTTTcctggat AAAAUGAA m8a Created HHFCT_31381_cluster-3908_100_65
hsa-miR-3662 tTCATTTTCctggat GAAAAUGA m8a (m7a->m8a) HHFCT_31381_cluster-3908_100_65
hsa-miR-4685-5p ttcatttCCCTGGat CCCAGGGC m6b Disrupted HHFCT_31381_cluster-3908_100_65
hsa-miR-5093 ttCATTTCCctggat AGGAAAUG m7b (m7b->m6b) HHFCT_31381_cluster-3908_100_65
hsa-miR-5584-5p ttcaTTTCCCTGgat CAGGGAAA m8a Disrupted HHFCT_31381_cluster-3908_100_65
hsa-miR-665 ttcatttTCCTGGat ACCAGGAG m6b Created HHFCT_31381_cluster-3908_100_65
hsa-miR-6754-5p ttcattTCCCTGGat CCAGGGAG m7a Disrupted HHFCT_31381_cluster-3908_100_65
hsa-miR-6837-5p ttcatttCCCTGGat ACCAGGGC m6b Disrupted HHFCT_31381_cluster-3908_100_65
hsa-miR-7113-5p ttcattTCCCTGGAt UCCAGGGA m8a Disrupted HHFCT_31381_cluster-3908_100_65

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123589787C>T COSN6989949 8052859 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p atgTGTTTACtgggc UGUAAACA m7b Created HHFCT_31377_cluster-3908_95_26
hsa-miR-30b-5p atgTGTTTACtgggc UGUAAACA m7b Created HHFCT_31377_cluster-3908_95_26
hsa-miR-30c-5p atgTGTTTACtgggc UGUAAACA m7b Created HHFCT_31377_cluster-3908_95_26
hsa-miR-30d-5p atgTGTTTACtgggc UGUAAACA m7b Created HHFCT_31377_cluster-3908_95_26
hsa-miR-30e-5p atgTGTTTACtgggc UGUAAACA m7b Created HHFCT_31377_cluster-3908_95_26
hsa-miR-545-5p atgtgTTTACTGggc UCAGUAAA m7b Created HHFCT_31377_cluster-3908_95_26

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123586237C>T COSN4618454
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6884-3p ggcGTGATGGagtcc CCCAUCAC m7b Created HHFCT_31328_cluster-3908_38_56

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123585159C>T COSN5897677 RK150_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4426 aagCCATCTTtgccc GAAGAUGG m7b Disrupted HHFCT_31318_cluster-3908_25_73
hsa-miR-4647 aagCCATCTTtgccc GAAGAUGG m7b Disrupted HHFCT_31318_cluster-3908_25_73
hsa-miR-4662b aagCCATCTTTgccc AAAGAUGG m8a Disrupted HHFCT_31318_cluster-3908_25_73

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123584753C>T COSN6989947 8057501 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-380-5p gaagaGTCAACCcat UGGUUGAC m7b Disrupted HHFCT_31316_cluster-3908_23_152
hsa-miR-3940-5p gaagagtCAACCCAt GUGGGUUG m7b Disrupted HHFCT_31316_cluster-3908_23_152
hsa-miR-4507 gaagagtCAACCCAt CUGGGUUG m7b Disrupted HHFCT_31316_cluster-3908_23_152
hsa-miR-4522 gaAGAGTCAacccat UGACUCUG m7a (m7a->m6a) HHFCT_31316_cluster-3908_23_152
hsa-miR-563 gaagaGTCAACCcat AGGUUGAC m7b Disrupted HHFCT_31316_cluster-3908_23_152
hsa-miR-618 gaAGAGTTaacccat AAACUCUA m6b Created HHFCT_31316_cluster-3908_23_152

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123583499T>C COSN10079739 C0027T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3939 atcTGCGCGTccatc UACGCGCA m7b Created HHFKP_30060_cluster-3908_9_12

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123581945CGG>CCA COSN55080
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3661 aggcatcCCAGGTCccc UGACCUGG m7b Created HHFCT_31304_cluster-3908_11_32
hsa-miR-619-5p aggcATCCCAGgtcccc GCUGGGAU m7b Created HHFCT_31304_cluster-3908_11_32
hsa-miR-631 aggcatcCCAGGTCccc AGACCUGG m7b Created HHFCT_31304_cluster-3908_11_32
hsa-miR-6506-5p aggcATCCCAGgtcccc ACUGGGAU m7b Created HHFCT_31304_cluster-3908_11_32
hsa-miR-6728-5p aggCATCCCAggtcccc UUGGGAUG m7b Created HHFCT_31304_cluster-3908_11_32
hsa-miR-7851-3p aggcatCCCAGGTcccc UACCUGGG m7b Created HHFCT_31304_cluster-3908_11_32

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123577418G>C COSM3676009 SNUH_G14_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4754 tccTCCGCAagcggt AUGCGGAC m6b Created HHFCT_31295_cluster-3908_1_28
hsa-miR-658 tCCTCCGCaagcggt GGCGGAGG m7b Created HHFCT_31295_cluster-3908_1_28
hsa-miR-6850-5p tccTCCGCAagcggt GUGCGGAA m6b Created HHFCT_31295_cluster-3908_1_28
hsa-miR-4754 tccTCCGCAagcggt AUGCGGAC m6b Created HHFCT_31295_cluster-3908_1_28
hsa-miR-658 tCCTCCGCaagcggt GGCGGAGG m7b Created HHFCT_31295_cluster-3908_1_28
hsa-miR-6850-5p tccTCCGCAagcggt GUGCGGAA m6b Created HHFCT_31295_cluster-3908_1_28

Mutation Mutation ID Sample Name Cancer Type
chr11:g.123577398G>A COSM3808626 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4690-5p cacgccgGCCTGCTc GAGCAGGC m7b Disrupted HHFCT_31295_cluster-3908_1_28
hsa-miR-4690-5p cacgccgGCCTGCTc GAGCAGGC m7b Disrupted HHFCT_31295_cluster-3908_1_28
Mutation Mutation ID Sample Name Cancer Type
chr11:g.123577395C>T COSM1208816 587286 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr11:g.123577394G>A COSM1585463 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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