SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0064704
Gene Symbol: GLB1
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Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.33021642G>A COSM4584260 12-P412 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-5p acagTGGAAGCagct AGCUUCCA m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-3156-3p acAGTGGGAGcagct CUCCCACU m8a Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-4436b-5p acAGTGGAagcagct GUCCACUU m6b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-532-3p acaGTGGGAGcagct CCUCCCAC m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-6509-3p aCAGTGGAAgcagct UUCCACUG m8a (m7a->m8a) HHFKP_96112_cluster-16447_10_212
hsa-miR-7106-3p acagtGGGAGCagct AGCUCCCU m6b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-2115-5p acagTGGAAGCagct AGCUUCCA m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-3156-3p acAGTGGGAGcagct CUCCCACU m8a Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-4436b-5p acAGTGGAagcagct GUCCACUU m6b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-532-3p acaGTGGGAGcagct CCUCCCAC m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-6509-3p aCAGTGGAAgcagct UUCCACUG m8a (m7a->m8a) HHFKP_96112_cluster-16447_10_212
hsa-miR-7106-3p acagtGGGAGCagct AGCUCCCU m6b Disrupted HHFKP_96112_cluster-16447_10_212

Mutation Mutation ID Sample Name Cancer Type
chr3:g.33021640G>T COSM2984234 SW48 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3151-3p agtgGGATCAGctct CCUGAUCC m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-3156-3p AGTGGGAGcagctct CUCCCACU m8a Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-3160-3p agtgggaTCAGCTCt AGAGCUGA m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-558 agtgggaGCAGCTCt UGAGCUGC m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-7106-3p agtGGGAGCagctct AGCUCCCU m6b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-3151-3p agtgGGATCAGctct CCUGAUCC m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-3156-3p AGTGGGAGcagctct CUCCCACU m8a Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-3160-3p agtgggaTCAGCTCt AGAGCUGA m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-558 agtgggaGCAGCTCt UGAGCUGC m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-7106-3p agtGGGAGCagctct AGCUCCCU m6b Disrupted HHFKP_96112_cluster-16447_10_212

Mutation Mutation ID Sample Name Cancer Type
chr3:g.33021634C>A COSM4786047 TCGA-AY-6197-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-198 agcagcTCTGGACat GGUCCAGA m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-3912-5p agcagctATGGACAt AUGUCCAU m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-520a-5p agcagCTCTGGAcat CUCCAGAG m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-525-5p agcagCTCTGGAcat CUCCAGAG m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-558 aGCAGCTCtggacat UGAGCUGC m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-6501-3p agcaGCTCTGGacat CCAGAGCA m7a Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-198 agcagcTCTGGACat GGUCCAGA m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-3912-5p agcagctATGGACAt AUGUCCAU m7b Created HHFKP_96112_cluster-16447_10_212
hsa-miR-520a-5p agcagCTCTGGAcat CUCCAGAG m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-525-5p agcagCTCTGGAcat CUCCAGAG m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-558 aGCAGCTCtggacat UGAGCUGC m7b Disrupted HHFKP_96112_cluster-16447_10_212
hsa-miR-6501-3p agcaGCTCTGGacat CCAGAGCA m7a Disrupted HHFKP_96112_cluster-16447_10_212

Mutation Mutation ID Sample Name Cancer Type
chr3:g.33018499C>G COSM4834571 TCGA-Q1-A73O-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4257 cACCTCTGtcttcac CCAGAGGU m7b Created HHFCT_103471_cluster-16447_10_2193
hsa-miR-4709-3p cacctctCTCTTCAc UUGAAGAG m7b Disrupted HHFCT_103471_cluster-16447_10_2193
hsa-miR-6758-5p caCCTCTCTcttcac UAGAGAGG m7b (m7b->m6b) HHFCT_103471_cluster-16447_10_2193
hsa-miR-4257 cACCTCTGtcttcac CCAGAGGU m7b Created HHFCT_103471_cluster-16447_10_2193
hsa-miR-4709-3p cacctctCTCTTCAc UUGAAGAG m7b Disrupted HHFCT_103471_cluster-16447_10_2193
hsa-miR-6758-5p caCCTCTCTcttcac UAGAGAGG m7b (m7b->m6b) HHFCT_103471_cluster-16447_10_2193

Mutation Mutation ID Sample Name Cancer Type
chr3:g.33018495CTT>T COSM4687062 T3021 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4709-3p cctctCTCTTCAcccct UUGAAGAG m7b Disrupted HHFCT_103471_cluster-16447_10_2193
hsa-miR-6856-5p CCTCTCTTcacccct AAGAGAGG m8a Created HHFCT_103471_cluster-16447_10_2193
hsa-miR-4709-3p cctctCTCTTCAcccct UUGAAGAG m7b Disrupted HHFCT_103471_cluster-16447_10_2193
hsa-miR-6856-5p CCTCTCTTcacccct AAGAGAGG m8a Created HHFCT_103471_cluster-16447_10_2193

Mutation Mutation ID Sample Name Cancer Type
chr3:g.33018474G>A COSM1208253 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3138 aGTCCACAatcgagc UGUGGACA m7a Created HHFCT_103471_cluster-16447_10_2193
hsa-miR-6833-5p agTCCACAatcgagc GUGUGGAA m6b Created HHFCT_103471_cluster-16447_10_2193

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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