SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0064703
Gene Symbol: GLB1
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.33014252C>T COSM3592494 TCGA-DA-A1HY-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-3p atctttCCACTGGac CCAGUGGG m7a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199a-5p atctttcCACTGGac CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199b-5p atctttcCACTGGac CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-3978 atCTTTCCACtggac GUGGAAAG m8a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-936 atcttTCTACTGgac ACAGUAGA m7b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-194-3p atctttCCACTGGac CCAGUGGG m7a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199a-5p atctttcCACTGGac CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199b-5p atctttcCACTGGac CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-3978 atCTTTCCACtggac GUGGAAAG m8a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-936 atcttTCTACTGgac ACAGUAGA m7b Created HHFKP_96110_cluster-16447_8_19

Mutation Mutation ID Sample Name Cancer Type
chr3:g.33014247G>C COSM4818668 TCGA-JW-A5VJ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p tccACTGCACactga GGUGCAGU m7b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-145-5p tccACTGGACactga GUCCAGUU m7a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-194-3p tCCACTGGacactga CCAGUGGG m7a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-198 tccaCTGGACactga GGUCCAGA m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199a-5p tcCACTGGacactga CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199b-5p tcCACTGGacactga CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-4302 tccactgCACACTGa CCAGUGUG m7b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-5693 tCCACTGCacactga GCAGUGGC m7a Created HHFKP_96110_cluster-16447_8_19
hsa-miR-648 tccactGCACACTga AAGUGUGC m7b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-6499-3p tcCACTGCacactga AGCAGUGU m6b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-6733-3p tccactgGACACTGa UCAGUGUC m7b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-143-5p tccACTGCACactga GGUGCAGU m7b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-145-5p tccACTGGACactga GUCCAGUU m7a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-194-3p tCCACTGGacactga CCAGUGGG m7a Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-198 tccaCTGGACactga GGUCCAGA m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199a-5p tcCACTGGacactga CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-199b-5p tcCACTGGacactga CCCAGUGU m6b Disrupted HHFKP_96110_cluster-16447_8_19
hsa-miR-4302 tccactgCACACTGa CCAGUGUG m7b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-5693 tCCACTGCacactga GCAGUGGC m7a Created HHFKP_96110_cluster-16447_8_19
hsa-miR-648 tccactGCACACTga AAGUGUGC m7b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-6499-3p tcCACTGCacactga AGCAGUGU m6b Created HHFKP_96110_cluster-16447_8_19
hsa-miR-6733-3p tccactgGACACTGa UCAGUGUC m7b Disrupted HHFKP_96110_cluster-16447_8_19

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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