SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0055423
Gene Symbol: GGCX
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.85561386G>T COSM4653574 SNU-C4 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-544b cagCTCAGGTaggct ACCUGAGG m7a Disrupted HHFKP_76798_cluster-13750_12_10
hsa-miR-556-5p cAGCTCATgtaggct GAUGAGCU m7b Created HHFKP_76798_cluster-13750_12_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85553485CCTA>A COSM4997609 Sample_1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1277-3p atgtTCTACGTcatg UACGUAGA m7b Created HHFKP_76791_cluster-13750_4_10
hsa-miR-4434 atgTTCTCCTacgtcatg AGGAGAAG m7a Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-4757-3p atgttctACGTCATG CAUGACGU m8a Created HHFKP_76791_cluster-13750_4_10
hsa-miR-5703 atgTTCTCCTacgtcatg AGGAGAAG m7a Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-6888-5p atgtTCTCCTacgtcatg AAGGAGAU m6b Disrupted HHFKP_76791_cluster-13750_4_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85553480A>C COSM4455808 CSCC-16-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1286 ctacGTCCTGCtggc UGCAGGAC m7b Created HHFKP_76791_cluster-13750_4_10
hsa-miR-214-3p ctacgtCCTGCTGgc ACAGCAGG m7b Created HHFKP_76791_cluster-13750_4_10
hsa-miR-338-3p ctacgtcATGCTGGc UCCAGCAU m7b Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-3619-5p ctacgtCCTGCTGgc UCAGCAGG m7b Created HHFKP_76791_cluster-13750_4_10
hsa-miR-4530 ctacgtcCTGCTGGc CCCAGCAG m7b Created HHFKP_76791_cluster-13750_4_10
hsa-miR-4757-3p ctACGTCATGctggc CAUGACGU m8a Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-6076 ctacGTCATGCTggc AGCAUGAC m8a Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-6165 ctacgTCCTGCTGgc CAGCAGGA m8a Created HHFKP_76791_cluster-13750_4_10
hsa-miR-6797-3p ctacGTCATGCtggc UGCAUGAC m7b Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-761 ctacgtCCTGCTGgc GCAGCAGG m7b Created HHFKP_76791_cluster-13750_4_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85553469C>T COSM4407872 8044654 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-193a-3p tGGCCAGTagccctc AACUGGCC m7b Created HHFKP_76791_cluster-13750_4_10
hsa-miR-193b-3p tGGCCAGTagccctc AACUGGCC m7b Created HHFKP_76791_cluster-13750_4_10
hsa-miR-3176 tGGCCAGTagccctc ACUGGCCU m7a Created HHFKP_76791_cluster-13750_4_10
hsa-miR-3692-5p tggCCAGCAGccctc CCUGCUGG m7b Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-4446-3p tggccagCAGCCCTc CAGGGCUG m7b Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-6762-3p tggccAGCAGCCctc UGGCUGCU m7b Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-6829-5p tggccaGCAGCCCtc UGGGCUGC m7b Disrupted HHFKP_76791_cluster-13750_4_10
hsa-miR-892b tgGCCAGTagccctc CACUGGCU m6b Created HHFKP_76791_cluster-13750_4_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85552979G>T COSM4974613 1N33-VS-1T33 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4761-5p acctACCTTGatggc ACAAGGUG m6b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-6884-3p acctaccGTGATGGc CCCAUCAC m7b Disrupted HHFCT_82655_cluster-13750_5_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85552971C>T COSM4686856 T3064 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-3p tgatggcTGCACTGg UCAGUGCA m7b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-148b-3p tgatggcTGCACTGg UCAGUGCA m7b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-152-3p tgatggcTGCACTGg UCAGUGCA m7b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-3944-5p tgatgGCTGCACtgg UGUGCAGC m7b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-4529-5p tGATGGCCgcactgg AGGCCAUC m7b Disrupted HHFCT_82655_cluster-13750_5_9
hsa-miR-7156-3p tgatGGCTGCActgg CUGCAGCC m7b Created HHFCT_82655_cluster-13750_5_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85552970G>A COSM4758392 pfg057T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1825 gatggccGCACTGGc UCCAGUGC m7b Disrupted HHFCT_82655_cluster-13750_5_9
hsa-miR-199a-5p gatggccACACTGGc CCCAGUGU m7b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-199b-5p gatggccACACTGGc CCCAGUGU m7b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-3187-3p gATGGCCAcactggc UUGGCCAU m7b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-4302 gatggcCACACTGGc CCAGUGUG m8a Created HHFCT_82655_cluster-13750_5_9
hsa-miR-644a gatgGCCACACTggc AGUGUGGC m8a Created HHFCT_82655_cluster-13750_5_9
hsa-miR-663b gatGGCCACactggc GGUGGCCC m6b Created HHFCT_82655_cluster-13750_5_9
hsa-miR-7108-5p gatGGCCACACtggc GUGUGGCC m8a Created HHFCT_82655_cluster-13750_5_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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