SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0066583
Gene Symbol: GBE1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.81642344T>C COSN8368387 tumor_4166706 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19b-2-5p ataactaCAAAACaa AGUUUUGC m6b Created HPSEF_15840_G19076.1_81691485
hsa-miR-4703-3p atAACTACAaaacaa UGUAGUUG m7a (m6a->m7a) HPSEF_15840_G19076.1_81691485
hsa-miR-3674 ataaCTACAAaacaa AUUGUAGA m6b Created HPSEF_15840_G19076.1_81691485
hsa-miR-2052 ataactaCAAAACAa UGUUUUGA m7a Created HPSEF_15840_G19076.1_81691485
hsa-miR-19b-1-5p ataactaCAAAACaa AGUUUUGC m6b Created HPSEF_15840_G19076.1_81691485
hsa-miR-19a-5p ataactaCAAAACaa AGUUUUGC m6b Created HPSEF_15840_G19076.1_81691485

Mutation Mutation ID Sample Name Cancer Type
chr3:g.81641994A>T COSN6779695 RK128_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-510-3p gcaaaGTTTCAAgta AUUGAAAC m7b Created HPSEF_15839_G19075.1_81691149
hsa-miR-4738-3p gcaaAGTTTCAagta UGAAACUG m7a Created HPSEF_15839_G19075.1_81691149

Mutation Mutation ID Sample Name Cancer Type
chr3:g.81608259C>T COSN8928559 SS6003109 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-556-5p catAGCTCATaagca GAUGAGCU m7b Disrupted HHFCT_105436_uc003dqg.2_31_6

Mutation Mutation ID Sample Name Cancer Type
chr3:g.81594009G>A COSM3597739 TCGA-EE-A20F-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-590-3p atttTAAAATTcctt UAAUUUUA m7b Created HHFKP_97665_uc003dqg.2_21_12
hsa-miR-302a-5p atTTTAAGattcctt ACUUAAAC m6b Disrupted HHFKP_97665_uc003dqg.2_21_12
hsa-miR-590-3p atttTAAAATTcctt UAAUUUUA m7b Created HHFKP_97665_uc003dqg.2_21_12

Mutation Mutation ID Sample Name Cancer Type
chr3:g.81591127A>G COSM1048728 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3940-3p atttCGGGCTacaag CAGCCCGG m6b Created HHFKP_97664_uc003dqg.2_20_11
hsa-miR-6723-5p atttCGGACTAcaag AUAGUCCG m7b Disrupted HHFKP_97664_uc003dqg.2_20_11
hsa-miR-3940-3p atttCGGGCTacaag CAGCCCGG m6b Created HHFKP_97664_uc003dqg.2_20_11
hsa-miR-6723-5p atttCGGACTAcaag AUAGUCCG m7b Disrupted HHFKP_97664_uc003dqg.2_20_11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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