SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0032845
Gene Symbol: GALC
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.87941512A>G COSM4578043 CHLA-258 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-5p ccctgaCACAGGagg CCCUGUGC m6b Disrupted HHFCT_45845_cluster-7000_5_8
hsa-miR-1976 ccctgacGCAGGAGg CCUCCUGC m7b Created HHFCT_45845_cluster-7000_5_8
hsa-miR-3193 ccctgACGCAGGAgg UCCUGCGU m8a Created HHFCT_45845_cluster-7000_5_8
hsa-miR-4520-5p ccctgACGCAGGagg CCUGCGUG m7a Created HHFCT_45845_cluster-7000_5_8
hsa-miR-592 cccTGACACAggagg UUGUGUCA m7b Disrupted HHFCT_45845_cluster-7000_5_8

Mutation Mutation ID Sample Name Cancer Type
chr14:g.87934870C>T COSM4474446 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p gtCATTTCACctctg GUGAAAUG m8a Disrupted HHFCT_45844_cluster-7000_4_8
hsa-miR-3646 gTCATTTTacctctg AAAAUGAA m7a Created HHFCT_45844_cluster-7000_4_8
hsa-miR-3662 gTCATTTTacctctg GAAAAUGA m7b Created HHFCT_45844_cluster-7000_4_8
hsa-miR-7854-3p gtcattTCACCTCtg UGAGGUGA m7b Disrupted HHFCT_45844_cluster-7000_4_8

Mutation Mutation ID Sample Name Cancer Type
chr14:g.87934859T>A COSM269221 TCGA-AA-3715-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4310 tctggcATGCTGaat GCAGCAUU m6b Disrupted HHFCT_45844_cluster-7000_4_8
hsa-miR-7157-5p tctggcATGCTGAat UCAGCAUU m7a Disrupted HHFCT_45844_cluster-7000_4_8

Mutation Mutation ID Sample Name Cancer Type
chr14:g.87934850A>T COSM4932676 TCGA-UB-A7MB-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4262 cTGAATGTCaagtct GACAUUCA m8a (m7a->m8a) HHFCT_45844_cluster-7000_4_8
hsa-miR-489-3p ctgaATGTCAagtct GUGACAUC m6b Created HHFCT_45844_cluster-7000_4_8
hsa-miR-616-3p ctgAATGACaagtct AGUCAUUG m6b Disrupted HHFCT_45844_cluster-7000_4_8
hsa-miR-4262 cTGAATGTCaagtct GACAUUCA m8a (m7a->m8a) HHFCT_45844_cluster-7000_4_8
hsa-miR-489-3p ctgaATGTCAagtct GUGACAUC m6b Created HHFCT_45844_cluster-7000_4_8
hsa-miR-616-3p ctgAATGACaagtct AGUCAUUG m6b Disrupted HHFCT_45844_cluster-7000_4_8

Mutation Mutation ID Sample Name Cancer Type
chr14:g.87934840G>A COSM4783866 TCGA-G4-6628-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3912-5p agtctctATGGACAg AUGUCCAU m7b Created HHFCT_45844_cluster-7000_4_8
hsa-miR-3976 agTCTCTATggacag UAUAGAGA m7b (m6b->m7b) HHFCT_45844_cluster-7000_4_8
hsa-miR-3912-5p agtctctATGGACAg AUGUCCAU m7b Created HHFCT_45844_cluster-7000_4_8
hsa-miR-3976 agTCTCTATggacag UAUAGAGA m7b (m6b->m7b) HHFCT_45844_cluster-7000_4_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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