SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0076291
Gene Symbol: FOXP4
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.41587045C>T COSM3928463 TCGA-E1-5322-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-28-5p gcagcAGCTCCTgca AAGGAGCU m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-3139 gcagcAGCTCCTgca UAGGAGCU m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-4722-5p gcagcagCTCCTGCa GGCAGGAG m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-558 gcaGCAGCTCctgca UGAGCUGC m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-708-5p gcagcAGCTCCTgca AAGGAGCU m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-873-5p gcagcaGTTCCTGCa GCAGGAAC m8a Created HHFKP_126863_uc003oql.1_19_145
hsa-miR-28-5p gcagcAGCTCCTgca AAGGAGCU m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-3139 gcagcAGCTCCTgca UAGGAGCU m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-4722-5p gcagcagCTCCTGCa GGCAGGAG m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-558 gcaGCAGCTCctgca UGAGCUGC m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-708-5p gcagcAGCTCCTgca AAGGAGCU m7b Disrupted HHFKP_126863_uc003oql.1_19_145
hsa-miR-873-5p gcagcaGTTCCTGCa GCAGGAAC m8a Created HHFKP_126863_uc003oql.1_19_145
Mutation Mutation ID Sample Name Cancer Type
chr6:g.41587027C>T COSM4648992 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.41572036C>T COSN5630259 RK105_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5585-3p cttcCTATTCAaaat CUGAAUAG m7b Created HHFCT_138034_uc003oql.1_12_8
hsa-miR-6869-5p cttcCTACTCAaaat GUGAGUAG m7b Disrupted HHFCT_138034_uc003oql.1_12_8
hsa-miR-8055 cttcctaCTCAAAat CUUUGAGC m6b Disrupted HHFCT_138034_uc003oql.1_12_8
hsa-miR-8065 cTTCCTACtcaaaat UGUAGGAA m7b Disrupted HHFCT_138034_uc003oql.1_12_8
hsa-miR-8081 cttcctACTCAAaat CUUGAGUC m6b Disrupted HHFCT_138034_uc003oql.1_12_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.41566686G>A COSN14872282 LP2000108-DNA_A01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-204-5p AAAGGGAAagtcatg UUCCCUUU m8a Created HHFCT_138029_uc003oql.1_7_8
hsa-miR-211-5p AAAGGGAAagtcatg UUCCCUUU m8a Created HHFCT_138029_uc003oql.1_7_8
hsa-miR-4287 aAAGGGAGAgtcatg UCUCCCUU m8a (m8a->m7a) HHFCT_138029_uc003oql.1_7_8
hsa-miR-4446-5p aaAGGGAAAgtcatg AUUUCCCU m7b (m6b->m7b) HHFCT_138029_uc003oql.1_7_8
hsa-miR-4469 aaAGGGAGagtcatg GCUCCCUC m6b Disrupted HHFCT_138029_uc003oql.1_7_8
hsa-miR-4685-3p aAAGGGAGAgtcatg UCUCCCUU m8a (m8a->m7a) HHFCT_138029_uc003oql.1_7_8
hsa-miR-4755-5p aAAGGGAAAgtcatg UUUCCCUU m8a (m7a->m8a) HHFCT_138029_uc003oql.1_7_8
hsa-miR-5006-3p aAAGGGAAAgtcatg UUUCCCUU m8a (m7a->m8a) HHFCT_138029_uc003oql.1_7_8
hsa-miR-6867-3p aaAGGGAGAGtcatg CUCUCCCU m8a Disrupted HHFCT_138029_uc003oql.1_7_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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