SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_004473
Gene Symbol: FOXE1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.97855394C>T COSN8519684 3676_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6077 gtttcagTCTTCCat GGGAAGAG m6b Created HHFCT_161665_uc004axu.1_2_14
hsa-miR-7-5p gtttcaGTCTTCCAt UGGAAGAC m8a Created HHFCT_161665_uc004axu.1_2_14
hsa-miR-3929 gttTCAGCCTtccat GAGGCUGA m7b Disrupted HHFCT_161665_uc004axu.1_2_14
hsa-miR-4419b gttTCAGCCTtccat GAGGCUGA m7b Disrupted HHFCT_161665_uc004axu.1_2_14
hsa-miR-4478 gttTCAGCCTtccat GAGGCUGA m7b Disrupted HHFCT_161665_uc004axu.1_2_14
hsa-miR-4499 gttTCAGTCTTccat AAGACUGA m8a Created HHFCT_161665_uc004axu.1_2_14

Mutation Mutation ID Sample Name Cancer Type
chr9:g.97854232A>C COSM2793169 C0017T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-574-5p acctCACACTCAacg UGAGUGUG m8a Disrupted HHFCT_161664_uc004axu.1_1_26
hsa-miR-4758-5p acctcaCACTCAacg GUGAGUGG m6b Disrupted HHFCT_161664_uc004axu.1_1_26
hsa-miR-6790-5p acctcACACTCAacg GUGAGUGU m7b Disrupted HHFCT_161664_uc004axu.1_1_26
hsa-miR-6804-5p acctCACCCTCAacg UGAGGGUG m8a Created HHFCT_161664_uc004axu.1_1_26
hsa-miR-6834-5p acctcaCCCTCAacg GUGAGGGA m6b Created HHFCT_161664_uc004axu.1_1_26
hsa-miR-3659 acctcACACTCAacg UGAGUGUU m7a Disrupted HHFCT_161664_uc004axu.1_1_26
hsa-miR-1226-5p acctcaCCCTCAacg GUGAGGGC m6b Created HHFCT_161664_uc004axu.1_1_26
hsa-miR-1238-5p acctcaCACTCAacg GUGAGUGG m6b Disrupted HHFCT_161664_uc004axu.1_1_26
hsa-miR-1294 ACCTCACActcaacg UGUGAGGU m8a Disrupted HHFCT_161664_uc004axu.1_1_26
hsa-miR-4710 aCCTCACCCtcaacg GGGUGAGG m8a (m7a->m8a) HHFCT_161664_uc004axu.1_1_26
hsa-miR-4658 acctcACACTCAacg GUGAGUGU m7b Disrupted HHFCT_161664_uc004axu.1_1_26

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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