SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_022963
Gene Symbol: FGFR4
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.177090536C>T COSM94321 TCGA-BR-6707-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3189-5p ccgtgtATGGGGCtg UGCCCCAU m7b Created HHFKP_121210_cluster-18423_2_46
hsa-miR-3678-5p ccgTGTACGGggctg UCCGUACA m7b Disrupted HHFKP_121210_cluster-18423_2_46
hsa-miR-4323 ccgtgtaTGGGGCTg CAGCCCCA m7b Created HHFKP_121210_cluster-18423_2_46
hsa-miR-3189-5p ccgtgtATGGGGCtg UGCCCCAU m7b Created HHFKP_121210_cluster-18423_2_46
hsa-miR-3678-5p ccgTGTACGGggctg UCCGUACA m7b Disrupted HHFKP_121210_cluster-18423_2_46
hsa-miR-4323 ccgtgtaTGGGGCTg CAGCCCCA m7b Created HHFKP_121210_cluster-18423_2_46

Mutation Mutation ID Sample Name Cancer Type
chr5:g.177090531G>A COSM4993845 SJBALL020789_D1 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_B_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4435 gCTGGCCATgtacgg AUGGCCAG m8a (m7a->m8a) HHFKP_121210_cluster-18423_2_46
hsa-miR-602 gctggCCGTGTacgg GACACGGG m6b Disrupted HHFKP_121210_cluster-18423_2_46
hsa-miR-942-3p gctgGCCATGTacgg CACAUGGC m7b Created HHFKP_121210_cluster-18423_2_46
hsa-miR-4435 gCTGGCCATgtacgg AUGGCCAG m8a (m7a->m8a) HHFKP_121210_cluster-18423_2_46
hsa-miR-602 gctggCCGTGTacgg GACACGGG m6b Disrupted HHFKP_121210_cluster-18423_2_46
hsa-miR-942-3p gctgGCCATGTacgg CACAUGGC m7b Created HHFKP_121210_cluster-18423_2_46

Mutation Mutation ID Sample Name Cancer Type
chr5:g.177090465G>C COSM3732795 81 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4436a cgtcTGTCCTGtggg GCAGGACA m7b Created HHFKP_121209_cluster-18423_1_26
hsa-miR-4700-3p cgtctGTCCTGTGgg CACAGGAC m8a Created HHFKP_121209_cluster-18423_1_26
hsa-miR-5000-3p cgtcTGTCCTGtggg UCAGGACA m7b Created HHFKP_121209_cluster-18423_1_26
hsa-miR-4436a cgtcTGTCCTGtggg GCAGGACA m7b Created HHFKP_121209_cluster-18423_1_26
hsa-miR-4700-3p cgtctGTCCTGTGgg CACAGGAC m8a Created HHFKP_121209_cluster-18423_1_26
hsa-miR-5000-3p cgtcTGTCCTGtggg UCAGGACA m7b Created HHFKP_121209_cluster-18423_1_26

Mutation Mutation ID Sample Name Cancer Type
chr5:g.177090460T>G COSM3761132 TCGA-AA-3712-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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