Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr4:g.1799433C>T
|
COSM4485134
|
CSCC-29-T
|
[skin][head_neck][carcinoma][squamous_cell_carcinoma]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-21-3p |
gcaGGTGTTGaatgc |
CAACACCA |
m7a |
Created |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-3065-3p |
gcaGGTGCTGAatgc |
UCAGCACC |
m8a |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-383-3p |
gcagGTGCTGaatgc |
ACAGCACU |
m6b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-421 |
gcaggTGTTGAatgc |
AUCAACAG |
m6b |
Created |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4272 |
gcaggtGTTGAATGc |
CAUUCAAC |
m8a |
Created |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6804-3p |
gCAGGTGCtgaatgc |
CGCACCUG |
m7b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6871-3p |
gcaGGTGCTGaatgc |
CAGCACCC |
m7a |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-21-3p |
gcaGGTGTTGaatgc |
CAACACCA |
m7a |
Created |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-3065-3p |
gcaGGTGCTGAatgc |
UCAGCACC |
m8a |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-383-3p |
gcagGTGCTGaatgc |
ACAGCACU |
m6b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-421 |
gcaggTGTTGAatgc |
AUCAACAG |
m6b |
Created |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4272 |
gcaggtGTTGAATGc |
CAUUCAAC |
m8a |
Created |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6804-3p |
gCAGGTGCtgaatgc |
CGCACCUG |
m7b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6871-3p |
gcaGGTGCTGaatgc |
CAGCACCC |
m7a |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-21-3p |
gcaGGTGTTGaatgc |
CAACACCA |
m7a |
Created |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-3065-3p |
gcaGGTGCTGAatgc |
UCAGCACC |
m8a |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-383-3p |
gcagGTGCTGaatgc |
ACAGCACU |
m6b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-421 |
gcaggTGTTGAatgc |
AUCAACAG |
m6b |
Created |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4272 |
gcaggtGTTGAATGc |
CAUUCAAC |
m8a |
Created |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6804-3p |
gCAGGTGCtgaatgc |
CGCACCUG |
m7b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6871-3p |
gcaGGTGCTGaatgc |
CAGCACCC |
m7a |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-21-3p |
gcaGGTGTTGaatgc |
CAACACCA |
m7a |
Created |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-3065-3p |
gcaGGTGCTGAatgc |
UCAGCACC |
m8a |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-383-3p |
gcagGTGCTGaatgc |
ACAGCACU |
m6b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-421 |
gcaggTGTTGAatgc |
AUCAACAG |
m6b |
Created |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4272 |
gcaggtGTTGAATGc |
CAUUCAAC |
m8a |
Created |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6804-3p |
gCAGGTGCtgaatgc |
CGCACCUG |
m7b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-6871-3p |
gcaGGTGCTGaatgc |
CAGCACCC |
m7a |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
Mutation
|
Mutation ID
|
Sample Name
|
Cancer Type
|
chr4:g.1799410TG>T
|
COSM4616015
|
SW48
|
[large_intestine][NS][other][neoplasm]
|
miRNA Targets Table
|
miR ID |
miRSite |
miRSeed |
SeedClass |
FuncClass |
Cluster ID |
hsa-miR-4733-3p |
gtCCTGGTGGggcccc |
CCACCAGG |
m8a |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4758-3p |
gtcctgGTGGGGCccc |
UGCCCCAC |
m7b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-874-5p |
gtcctggTGGGGCCcc |
CGGCCCCA |
m7b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4733-3p |
gtCCTGGTGGggcccc |
CCACCAGG |
m8a |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4758-3p |
gtcctgGTGGGGCccc |
UGCCCCAC |
m7b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-874-5p |
gtcctggTGGGGCCcc |
CGGCCCCA |
m7b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4733-3p |
gtCCTGGTGGggcccc |
CCACCAGG |
m8a |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4758-3p |
gtcctgGTGGGGCccc |
UGCCCCAC |
m7b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-874-5p |
gtcctggTGGGGCCcc |
CGGCCCCA |
m7b |
Disrupted |
HHHNA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4733-3p |
gtCCTGGTGGggcccc |
CCACCAGG |
m8a |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-4758-3p |
gtcctgGTGGGGCccc |
UGCCCCAC |
m7b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
hsa-miR-874-5p |
gtcctggTGGGGCCcc |
CGGCCCCA |
m7b |
Disrupted |
HHHSA_17186_FGFR3|NM_000142|exon_CDS|-3.99324273961745|1.31411654694036 |
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.