SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_203301
Gene Symbol: FBXO33
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.39431904G>A COSM4602371 WSU-HN6 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-92a-1-5p ggcgCCCAACCggct AGGUUGGG m7b Created HHFKP_42849_cluster-6850_14_8
hsa-miR-3147 ggcGCCCAACCggct GGUUGGGC m8a Created HHFKP_42849_cluster-6850_14_8
hsa-miR-6499-5p gGCGCCCGAccggct UCGGGCGC m8a (m8a->m7a) HHFKP_42849_cluster-6850_14_8
hsa-miR-4750-5p ggCGCCCGAccggct CUCGGGCG m7b (m7b->m6b) HHFKP_42849_cluster-6850_14_8

Mutation Mutation ID Sample Name Cancer Type
chr14:g.39399653C>T COSM416691 TCGA-DK-A1A3-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-2-3p tccagTGTATAacct AUAUACAG m6b Created HHFCT_44691_cluster-6850_11_9
hsa-miR-1185-1-3p tccagTGTATAacct AUAUACAG m6b Created HHFCT_44691_cluster-6850_11_9
hsa-let-7f-2-3p tccagTGTATAacct CUAUACAG m6b Created HHFCT_44691_cluster-6850_11_9
hsa-let-7f-1-3p tccagTGTATAacct CUAUACAA m6b Created HHFCT_44691_cluster-6850_11_9
hsa-let-7b-3p tccagTGTATAacct CUAUACAA m6b Created HHFCT_44691_cluster-6850_11_9
hsa-let-7a-3p tccagTGTATAacct CUAUACAA m6b Created HHFCT_44691_cluster-6850_11_9
hsa-miR-4789-5p tccaGTGTATAacct GUAUACAC m7b Created HHFCT_44691_cluster-6850_11_9
hsa-miR-491-3p tccagTGCATAAcct CUUAUGCA m7b Disrupted HHFCT_44691_cluster-6850_11_9
hsa-miR-501-3p tccaGTGCATaacct AAUGCACC m6b Disrupted HHFCT_44691_cluster-6850_11_9
hsa-miR-502-3p tccaGTGCATaacct AAUGCACC m6b Disrupted HHFCT_44691_cluster-6850_11_9
hsa-miR-6757-3p tCCAGTGTataacct AACACUGG m7b Created HHFCT_44691_cluster-6850_11_9
hsa-miR-98-3p tccagTGTATAacct CUAUACAA m6b Created HHFCT_44691_cluster-6850_11_9

Mutation Mutation ID Sample Name Cancer Type
chr14:g.39399649A>C COSM1206829 587350 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-154-5p gtgcATAACCTtatt UAGGUUAU m7b Disrupted HHFCT_44691_cluster-6850_11_9
hsa-miR-491-3p gTGCATAAccttatt CUUAUGCA m7b Disrupted HHFCT_44691_cluster-6850_11_9

Mutation Mutation ID Sample Name Cancer Type
chr14:g.39399608GC>C COSM4683980 T228 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4480 aacCTTGGCatgcagt AGCCAAGU m6b Disrupted HHKTA_48775_NM_203301|1914|1953|1.42784205470798|0.657024863384268
hsa-miR-4666b aaccttgCATGCAgt UUGCAUGU m6b Created HHKTA_48775_NM_203301|1914|1953|1.42784205470798|0.657024863384268
hsa-miR-5011-3p aaccttgCATGCAgt GUGCAUGG m6b Created HHKTA_48775_NM_203301|1914|1953|1.42784205470798|0.657024863384268

Mutation Mutation ID Sample Name Cancer Type
chr14:g.39399604C>T COSM3987645 TCGA-BQ-5877-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-217 tggcATGCAGTcatg UACUGCAU m7b Disrupted HHKTA_48775_NM_203301|1914|1953|1.42784205470798|0.657024863384268
hsa-miR-6807-3p tggcATGCAGTcatg CACUGCAU m7b Disrupted HHKTA_48775_NM_203301|1914|1953|1.42784205470798|0.657024863384268

Mutation Mutation ID Sample Name Cancer Type
chr14:g.39399590G>A COSM4577857 10-P1058 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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