SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0035175
Gene Symbol: FBN1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr15:g.48642464C>A COSN14922069 LP6005409-DNA_F02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5692c caATATTATgaactt AAUAAUAU m7b (m6b->m7b) HPCB1_14489_G18248.1_48934660
hsa-miR-5692b caATATTATgaactt AAUAAUAU m7b (m6b->m7b) HPCB1_14489_G18248.1_48934660
hsa-miR-5000-5p caatattCTGAACTt CAGUUCAG m7b Disrupted HPCB1_14489_G18248.1_48934660

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48610777G>A COSM3969140 TCGA-DU-7006-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-448 caaatATATGCActt UUGCAUAU m7b Created HHFKP_47768_cluster-7929_41_31

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48610763C>T COSM349042 LUAD-YINHD [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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