SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0035159
Gene Symbol: FBN1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.48485484G>C COSM962392 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1287-5p gatgaATCCAGCAta UGCUGGAU m8a Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-20a-3p gatgAATGCAGcata ACUGCAUU m7b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-3135b gatgaaTCCAGCata GGCUGGAG m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-378j gatgAATCCAGcata ACUGGAUU m7b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4320 gatGAATCCagcata GGGAUUCU m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-6839-5p gatgAATCCAGcata UCUGGAUU m7b Created HHRBL_4990_BCBL1-2of3-SCL_4113

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48485483C>T COSM3420362 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-187-5p atgaaTGTAGCataa GGCUACAA m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-20a-3p atgAATGCAGcataa ACUGCAUU m7b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-221-3p atgaATGTAGCataa AGCUACAU m7b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-222-3p atgaATGTAGCataa AGCUACAU m7b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-3146 atgaatgTAGCATaa CAUGCUAG m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4262 aTGAATGTagcataa GACAUUCA m7b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4728-3p atgaatgCAGCATaa CAUGCUGA m6b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-5089-3p atgaatGTAGCATaa AUGCUACU m7a Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-548v atgaaTGTAGCataa AGCUACAG m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48485442C>G COSM701173 TCGA-43-6771-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-3p acaaACTGTGAaggc UCACAGUG m7a Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-216a-3p acaaACTGTGAaggc UCACAGUG m7a Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-27a-3p acaaACTGTGAAggc UUCACAGU m8a Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-27b-3p acaaACTGTGAAggc UUCACAGU m8a Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-3681-3p acaaACTGTGaaggc ACACAGUG m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-759 acaaACTCTGaaggc GCAGAGUG m6b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48485412C>T COSM4393200 TCGA-EJ-A65E-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7977 tgtcaGCTGGGAttt UUCCCAGC m7b Created HHRBL_4990_BCBL1-2of3-SCL_4113

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48485410G>A COSM4397758 CSCC-41-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1307-3p tcaGCCGAGatttgc ACUCGGCG m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4638-5p tcAGCCGAGatttgc ACUCGGCU m7b (m6b->m7b) HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4762-5p tcagccgAGATTTGc CCAAAUCU m7b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-605-5p tcagccGGGATTTgc UAAAUCCC m7b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48485396G>C COSM4188875 BK0094 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-211-3p cactaaTCCCTGacc GCAGGGAC m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4269 cactaaTGCCTGacc GCAGGCAC m6b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4441 cactaaTCCCTGacc ACAGGGAG m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-4514 cactaaTGCCTGacc ACAGGCAG m6b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-6715b-5p cactaaTGCCTGacc ACAGGCAC m6b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-6754-5p cactaaTCCCTGacc CCAGGGAG m6b Created HHRBL_4990_BCBL1-2of3-SCL_4113

Mutation Mutation ID Sample Name Cancer Type
chr15:g.48485382C>A COSM962391 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6076 cagagaTCATGCacc AGCAUGAC m6b Disrupted HHRBL_4990_BCBL1-2of3-SCL_4113
hsa-miR-7641 caGAGATCAtgcacc UUGAUCUC m7b (m7b->m6b) HHRBL_4990_BCBL1-2of3-SCL_4113

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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