SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0073462
Gene Symbol: ERAP1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr5:g.96785895C>G COSM1071461 TCGA-B5-A0JN-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-660-3p tgcattAGGAGGatg ACCUCCUG m6b Created HPCB1_33025_G42210.1_96121608

Mutation Mutation ID Sample Name Cancer Type
chr5:g.96785866ACTGG>G COSM1071460 TCGA-BS-A0UL-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3926 ctcTTTGGCCtttta UGGCCAAA m7b Created HHFCT_123854_cluster-18671_8_8
hsa-miR-4753-5p ctcttTGGCCTTtta CAAGGCCA m7b Created HHFCT_123854_cluster-18671_8_8
hsa-miR-6768-3p ctctttGGCCTTTta CAAAGGCC m7b Created HHFCT_123854_cluster-18671_8_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.96785864C>A COSM1439295 TCGA-AD-6889-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3662 gactggCATTTTaaa GAAAAUGA m6b Created HHFCT_123854_cluster-18671_8_8
hsa-miR-4484 gactgGCCTTTTaaa AAAAGGCG m7a Disrupted HHFCT_123854_cluster-18671_8_8
hsa-miR-4753-5p gacTGGCCTTttaaa CAAGGCCA m7b Disrupted HHFCT_123854_cluster-18671_8_8
hsa-miR-548an gactgGCCTTTTaaa AAAAGGCA m7a Disrupted HHFCT_123854_cluster-18671_8_8
hsa-miR-6768-3p gactGGCCTTTtaaa CAAAGGCC m7b Disrupted HHFCT_123854_cluster-18671_8_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser