SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0054448
Gene Symbol: EPAS1
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.46382046C>G COSM4970795 SJHGG042_D [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4267 gGAGCTGGcctttga UCCAGCUC m7b Created HHFCT_88153_cluster-12861_2_17
hsa-miR-4436b-3p ggagCTGCCCTttga CAGGGCAG m7b Disrupted HHFCT_88153_cluster-12861_2_17
hsa-miR-4632-5p ggagCTGCCCTttga GAGGGCAG m7b Disrupted HHFCT_88153_cluster-12861_2_17
hsa-miR-4660 gGAGCTGCcctttga UGCAGCUC m7b Disrupted HHFCT_88153_cluster-12861_2_17
hsa-miR-4753-5p ggagcTGGCCTTtga CAAGGCCA m7b Created HHFCT_88153_cluster-12861_2_17
hsa-miR-6735-5p ggagCTGCCCTttga CAGGGCAG m7b Disrupted HHFCT_88153_cluster-12861_2_17
hsa-miR-6768-3p ggagctGGCCTTTGa CAAAGGCC m8a Created HHFCT_88153_cluster-12861_2_17
hsa-miR-6879-5p ggagCTGCCCTttga CAGGGCAG m7b Disrupted HHFCT_88153_cluster-12861_2_17
hsa-miR-7843-5p ggagCTGCCCTttga GAGGGCAG m7b Disrupted HHFCT_88153_cluster-12861_2_17

Mutation Mutation ID Sample Name Cancer Type
chr2:g.46380679C>T COSM3910366 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-5p tGGGGCCCcctgtct AGGGCCCC m7b Disrupted HHFKP_81390_cluster-12861_4_44
hsa-miR-4459 tggggCCTCCTGtct CCAGGAGG m7b Created HHFKP_81390_cluster-12861_4_44
hsa-miR-4695-5p tgggGCCTCCTGtct CAGGAGGC m8a Created HHFKP_81390_cluster-12861_4_44
hsa-miR-5008-5p tgGGGCCTCctgtct UGAGGCCC m7b (m6b->m7b) HHFKP_81390_cluster-12861_4_44
hsa-miR-6798-5p tggggCCCCCTGtct CCAGGGGG m7b Disrupted HHFKP_81390_cluster-12861_4_44
hsa-miR-6805-5p tgggGCCCCCTgtct UAGGGGGC m7b Disrupted HHFKP_81390_cluster-12861_4_44

Mutation Mutation ID Sample Name Cancer Type
chr2:g.46380673G>T COSM4094402 TCGA-CD-A48A-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-5p cgccgttGGGGCCCc AGGGCCCC m7b Disrupted HHFKP_81390_cluster-12861_4_44
hsa-miR-3136-3p cgccgtTTGGGCCcc UGGCCCAA m7b Created HHFKP_81390_cluster-12861_4_44
hsa-miR-5699-5p cgccgTTGGGGCccc UGCCCCAA m7b Disrupted HHFKP_81390_cluster-12861_4_44
hsa-miR-6793-3p cgccGTTGGGGcccc UCCCCAAC m7b Disrupted HHFKP_81390_cluster-12861_4_44
hsa-miR-7155-3p cgccgtTTGGGCCcc UGGCCCAA m7b Created HHFKP_81390_cluster-12861_4_44
hsa-miR-874-5p cgccgtTGGGGCCcc CGGCCCCA m7b Disrupted HHFKP_81390_cluster-12861_4_44

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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