SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0054444
Gene Symbol: EPAS1
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.46360980C>G COSM1668889 HOP-62 [lung][NS][carcinoma][non_small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 gccTCATCATCatgt GAUGAUGA m8a Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-1322 gcctCATCATCatgt GAUGAUGC m7a Disrupted HHFKP_81389_cluster-12861_3_22

Mutation Mutation ID Sample Name Cancer Type
chr2:g.46360962C>T COSM3581828 TCGA-D9-A1JW-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6813-5p aggAGCCCCTGctgt CAGGGGCU m8a Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-6722-3p aggagCCCCTGCtgt UGCAGGGG m7b Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-6510-5p aggagcCCCTGCTGt CAGCAGGG m8a Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-6085 aggAGCCCCTgctgt AAGGGGCU m7b Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-761 aggagccCCTGCTGt GCAGCAGG m7b Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-922 aggagccTCTGCTGt GCAGCAGA m7b Created HHFKP_81389_cluster-12861_3_22
hsa-miR-3619-5p aggagccCCTGCTGt UCAGCAGG m7b Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-2467-5p agGAGCCTCtgctgt UGAGGCUC m7b (m6b->m7b) HHFKP_81389_cluster-12861_3_22
hsa-miR-2467-3p aggagCCTCTGCTgt AGCAGAGG m8a Created HHFKP_81389_cluster-12861_3_22
hsa-miR-214-3p aggagccCCTGCTGt ACAGCAGG m7b Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-1909-3p aggagCCCCTGCtgt CGCAGGGG m7b Disrupted HHFKP_81389_cluster-12861_3_22
hsa-miR-4283 agGAGCCCCtgctgt UGGGGCUC m7b (m7b->m6b) HHFKP_81389_cluster-12861_3_22

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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