SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0079880
Gene Symbol: ELMO1
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr7:g.36861694T>G COSM4587381 EWS502 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7150 ctcaaaCTGCCAact CUGGCAGG m6b Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-5707 cTCAAACGgccaact ACGUUUGA m7b Created HPSEF_21290_G25733.1_36901293
hsa-miR-548au-3p ctcaAACTGCCAact UGGCAGUU m8a Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-449b-5p ctcaaACTGCCaact AGGCAGUG m6b Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-449a ctcaaACTGCCAact UGGCAGUG m7a Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-7150 ctcaaaCTGCCAact CUGGCAGG m6b Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-5707 cTCAAACGgccaact ACGUUUGA m7b Created HPSEF_21290_G25733.1_36901293
hsa-miR-548au-3p ctcaAACTGCCAact UGGCAGUU m8a Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-449b-5p ctcaaACTGCCaact AGGCAGUG m6b Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-449a ctcaaACTGCCAact UGGCAGUG m7a Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-34c-5p ctcaaACTGCCaact AGGCAGUG m6b Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-34a-5p ctcaaACTGCCAact UGGCAGUG m7a Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-34a-5p ctcaaACTGCCAact UGGCAGUG m7a Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-34c-5p ctcaaACTGCCaact AGGCAGUG m6b Disrupted HPSEF_21290_G25733.1_36901293

Mutation Mutation ID Sample Name Cancer Type
chr7:g.36861682T>G COSM4752890 pfg102T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5000-5p aCTGAACTtcatcgc CAGUUCAG m7b Disrupted HPSEF_21290_G25733.1_36901293
hsa-miR-4757-3p actgaACGTCATcgc CAUGACGU m7b Created HPSEF_21290_G25733.1_36901293
hsa-miR-4757-3p actgaACGTCATcgc CAUGACGU m7b Created HPSEF_21290_G25733.1_36901293
hsa-miR-5000-5p aCTGAACTtcatcgc CAGUUCAG m7b Disrupted HPSEF_21290_G25733.1_36901293

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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