SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0015970
Gene Symbol: ELF3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.202012361G>A COSM1251113 ESO-085 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p TTCTGATGagctcag CAUCAGAA m8a Disrupted HHFKP_14118_cluster-976_3_157
hsa-miR-21-5p ttctgATAAGCTcag UAGCUUAU m7b Created HHFKP_14118_cluster-976_3_157
hsa-miR-27b-5p ttctgaTAAGCTCag AGAGCUUA m7b Created HHFKP_14118_cluster-976_3_157
hsa-miR-361-5p tTCTGATAAgctcag UUAUCAGA m8a (m7a->m8a) HHFKP_14118_cluster-976_3_157
hsa-miR-3670 ttctgaTGAGCTCag AGAGCUCA m7b Disrupted HHFKP_14118_cluster-976_3_157
hsa-miR-374a-3p ttCTGATAAGctcag CUUAUCAG m8a Created HHFKP_14118_cluster-976_3_157
hsa-miR-590-5p ttctgATAAGCTCag GAGCUUAU m8a Created HHFKP_14118_cluster-976_3_157
hsa-miR-2115-3p TTCTGATGagctcag CAUCAGAA m8a Disrupted HHFKP_14118_cluster-976_3_157
hsa-miR-21-5p ttctgATAAGCTcag UAGCUUAU m7b Created HHFKP_14118_cluster-976_3_157
hsa-miR-27b-5p ttctgaTAAGCTCag AGAGCUUA m7b Created HHFKP_14118_cluster-976_3_157
hsa-miR-361-5p tTCTGATAAgctcag UUAUCAGA m8a (m7a->m8a) HHFKP_14118_cluster-976_3_157
hsa-miR-3670 ttctgaTGAGCTCag AGAGCUCA m7b Disrupted HHFKP_14118_cluster-976_3_157
hsa-miR-374a-3p ttCTGATAAGctcag CUUAUCAG m8a Created HHFKP_14118_cluster-976_3_157
hsa-miR-590-5p ttctgATAAGCTCag GAGCUUAU m8a Created HHFKP_14118_cluster-976_3_157

Mutation Mutation ID Sample Name Cancer Type
chr1:g.202012356C>T COSM1295695 TCGA-G2-A2EO-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 aGCTCTTTtgatgag UAAAGAGC m7b Created HHFKP_14118_cluster-976_3_157
hsa-miR-2115-3p agctcTTCTGATGag CAUCAGAA m8a Disrupted HHFKP_14118_cluster-976_3_157
hsa-miR-5197-3p agCTCTTCTgatgag AAGAAGAG m7b (m7b->m6b) HHFKP_14118_cluster-976_3_157
hsa-miR-1276 aGCTCTTTtgatgag UAAAGAGC m7b Created HHFKP_14118_cluster-976_3_157
hsa-miR-2115-3p agctcTTCTGATGag CAUCAGAA m8a Disrupted HHFKP_14118_cluster-976_3_157
hsa-miR-5197-3p agCTCTTCTgatgag AAGAAGAG m7b (m7b->m6b) HHFKP_14118_cluster-976_3_157

Mutation Mutation ID Sample Name Cancer Type
chr1:g.202011181C>T COSM3481621 TCGA-EB-A5UL-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106b-3p actacttCAGTGCGa CCGCACUG m7b Disrupted HHFKP_14117_cluster-976_2_22
hsa-miR-548a-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ab acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ad-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ae-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ak acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548am-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-562 aCTACTTTagtgcga AAAGUAGC m7a Created HHFKP_14117_cluster-976_2_22
hsa-miR-8054 acTACTTTagtgcga GAAAGUAC m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-106b-3p actacttCAGTGCGa CCGCACUG m7b Disrupted HHFKP_14117_cluster-976_2_22
hsa-miR-548a-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ab acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ad-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ae-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548ak acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-548am-5p acTACTTTagtgcga AAAAGUAA m6b Created HHFKP_14117_cluster-976_2_22
hsa-miR-562 aCTACTTTagtgcga AAAGUAGC m7a Created HHFKP_14117_cluster-976_2_22
hsa-miR-8054 acTACTTTagtgcga GAAAGUAC m6b Created HHFKP_14117_cluster-976_2_22

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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