SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0080221
Gene Symbol: EGFR
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.55143438A>G COSM1727960 019T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-3p tctaACTGTGAtgca UUCACAGU m7b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-27b-3p tctaACTGTGAtgca UUCACAGU m7b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-3681-3p tctaACTGTGatgca ACACAGUG m6b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-7112-3p tctaactGTGATGCa UGCAUCAC m7b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-27a-3p tctaACTGTGAtgca UUCACAGU m7b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-27b-3p tctaACTGTGAtgca UUCACAGU m7b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-3681-3p tctaACTGTGatgca ACACAGUG m6b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-7112-3p tctaactGTGATGCa UGCAUCAC m7b Created HHFKP_134856_cluster-20793_27_27

Mutation Mutation ID Sample Name Cancer Type
chr7:g.55143412C>T COSM3639720 TCGA-EE-A2GO-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6507-5p aaaATTCTTatgcct GAAGAAUA m6b Created HHFKP_134856_cluster-20793_27_27
hsa-miR-6507-5p aaaATTCTTatgcct GAAGAAUA m6b Created HHFKP_134856_cluster-20793_27_27

Mutation Mutation ID Sample Name Cancer Type
chr7:g.55143380A>T COSM4600429 WSU-HN30 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203b-3p cctgCAGTTCAtcag UUGAACUG m7b Created HHFKP_134855_cluster-20793_26_251
hsa-miR-4418 cCTGCAGTtcatcag CACUGCAG m7b Created HHFKP_134855_cluster-20793_26_251
hsa-miR-1205 CCTGCAGAtcatcag UCUGCAGG m8a Disrupted HHFKP_134855_cluster-20793_26_251
hsa-miR-203b-3p cctgCAGTTCAtcag UUGAACUG m7b Created HHFKP_134855_cluster-20793_26_251
hsa-miR-4418 cCTGCAGTtcatcag CACUGCAG m7b Created HHFKP_134855_cluster-20793_26_251

Mutation Mutation ID Sample Name Cancer Type
chr7:g.55143379G>T COSM1559805 TCGA-08-0390-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1205 aCCTGCAGAtcatca UCUGCAGG m8a (m8a->m7a) HHFKP_134855_cluster-20793_26_251
hsa-miR-3158-5p acCTGCAGatcatca CCUGCAGA m6b Disrupted HHFKP_134855_cluster-20793_26_251
hsa-miR-3682-3p acctgcaTATCATCa UGAUGAUA m7b Created HHFKP_134855_cluster-20793_26_251
hsa-miR-6511b-5p aCCTGCAGatcatca CUGCAGGC m7a Disrupted HHFKP_134855_cluster-20793_26_251
hsa-miR-1205 aCCTGCAGAtcatca UCUGCAGG m8a (m8a->m7a) HHFKP_134855_cluster-20793_26_251
hsa-miR-3158-5p acCTGCAGatcatca CCUGCAGA m6b Disrupted HHFKP_134855_cluster-20793_26_251
hsa-miR-3682-3p acctgcaTATCATCa UGAUGAUA m7b Created HHFKP_134855_cluster-20793_26_251
hsa-miR-6511b-5p aCCTGCAGatcatca CUGCAGGC m7a Disrupted HHFKP_134855_cluster-20793_26_251

Mutation Mutation ID Sample Name Cancer Type
chr7:g.55143367G>T COSM3639718 TCGA-D3-A2JP-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-607 ttcctTTTGAAaacc GUUCAAAU m6b Created HHFKP_134855_cluster-20793_26_251
hsa-miR-607 ttcctTTTGAAaacc GUUCAAAU m6b Created HHFKP_134855_cluster-20793_26_251

Mutation Mutation ID Sample Name Cancer Type
chr7:g.55143362C>T COSM4892885 TCGA-EE-A2MF-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-3p gCGAATTTctttgga CAAAUUCG m7b Created HHFKP_134855_cluster-20793_26_251

Mutation Mutation ID Sample Name Cancer Type
chr7:g.55143357G>A COSM4680390 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6772-3p gtGGAGCAAattcct UUGCUCCU m7a (m6a->m7a) HHFKP_134855_cluster-20793_26_251
hsa-miR-6772-3p gtGGAGCAAattcct UUGCUCCU m7a (m6a->m7a) HHFKP_134855_cluster-20793_26_251

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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