SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0067210
Gene Symbol: EEFSEC
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.128349824T>G COSN1912904 RK047_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-5p tggcAGGGATatgtg CAUCCCUU m6b Created HHFCT_111848_cluster-16129_37_8
hsa-miR-3144-3p tggcAGGTATATgtg AUAUACCU m8a Disrupted HHFCT_111848_cluster-16129_37_8
hsa-miR-4722-3p TGGCAGGTatatgtg ACCUGCCA m8a Disrupted HHFCT_111848_cluster-16129_37_8
hsa-miR-6752-3p tGGCAGGGAtatgtg UCCCUGCC m8a (m7a->m8a) HHFCT_111848_cluster-16129_37_8
hsa-miR-6866-3p tggcAGGGATatgtg GAUCCCUU m6b Created HHFCT_111848_cluster-16129_37_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.128349815C>A COSN9236140 AOCS-126-1-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3074-5p ccCAGGAAatggcag GUUCCUGC m6b Created HHFCT_111848_cluster-16129_37_8
hsa-miR-4659a-5p cccaggaCATGGCAg CUGCCAUG m7b Disrupted HHFCT_111848_cluster-16129_37_8
hsa-miR-4659b-5p cccaggaCATGGCAg UUGCCAUG m7b Disrupted HHFCT_111848_cluster-16129_37_8
hsa-miR-6783-3p CCCAGGAAatggcag UUCCUGGG m8a Created HHFCT_111848_cluster-16129_37_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.128341563T>A COSM4113248 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-5p tcaagAAAACCTttt GAGGUUUU m7b Created HHFKP_103838_cluster-16129_21_8
hsa-miR-4678 tcaagAATACCTTtt AAGGUAUU m8a Disrupted HHFKP_103838_cluster-16129_21_8
hsa-miR-548m tcaagaaTACCTTTt CAAAGGUA m7b Disrupted HHFKP_103838_cluster-16129_21_8
hsa-miR-630 tcaAGAATACctttt AGUAUUCU m7b Disrupted HHFKP_103838_cluster-16129_21_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.128341352G>A COSM1616855 BN23 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-3p gcgggttGGTGTGTg AACACACC m7b Disrupted HHRBC_9067_BC3-2of3-SCL_11391
hsa-miR-362-3p gcgggttGGTGTGTg AACACACC m7b Disrupted HHRBC_9067_BC3-2of3-SCL_11391
hsa-miR-603 gcgggttAGTGTGTg CACACACU m7b Created HHRBC_9067_BC3-2of3-SCL_11391
hsa-miR-329-3p gcgggttGGTGTGTg AACACACC m7b Disrupted HHRBL_10197_BCBL1-2of3-SCL_15529
hsa-miR-362-3p gcgggttGGTGTGTg AACACACC m7b Disrupted HHRBL_10197_BCBL1-2of3-SCL_15529
hsa-miR-603 gcgggttAGTGTGTg CACACACU m7b Created HHRBL_10197_BCBL1-2of3-SCL_15529

Mutation Mutation ID Sample Name Cancer Type
chr3:g.128295922G>A COSN7816712 8067075 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4728-3p ttcCAGCATGatgtg CAUGCUGA m7a Created HHFCT_111840_cluster-16129_29_6
hsa-miR-499a-3p ttccagcGTGATGTg AACAUCAC m7b Disrupted HHFCT_111840_cluster-16129_29_6
hsa-miR-499b-3p ttccagcGTGATGTg AACAUCAC m7b Disrupted HHFCT_111840_cluster-16129_29_6

Mutation Mutation ID Sample Name Cancer Type
chr3:g.128281465G>T COSN9236112 AOCS-143-1-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3973 tgACTTTGTatgcag ACAAAGUA m7a (m7a->m6a) HHFCT_111833_cluster-16129_22_7
hsa-miR-520d-5p tgaCTTTGTAtgcag CUACAAAG m7b Disrupted HHFCT_111833_cluster-16129_22_7
hsa-miR-520g-3p tgACTTTGTatgcag ACAAAGUG m7a (m7a->m6a) HHFCT_111833_cluster-16129_22_7
hsa-miR-520h tgACTTTGTatgcag ACAAAGUG m7a (m7a->m6a) HHFCT_111833_cluster-16129_22_7
hsa-miR-524-5p tgaCTTTGTAtgcag CUACAAAG m7b Disrupted HHFCT_111833_cluster-16129_22_7
hsa-miR-5689 tgacttTGTATGCag AGCAUACA m7b Disrupted HHFCT_111833_cluster-16129_22_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser