SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0074814
Gene Symbol: EBF1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.158708140C>T COSM4979503 3N22-VS-3T22 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4802-5p tCCTCCATAagcctc UAUGGAGG m8a (m7a->m8a) HHFCT_125903_uc010jip.1_38_9
hsa-miR-6514-5p tcCTCCATAagcctc UAUGGAGU m7a (m6a->m7a) HHFCT_125903_uc010jip.1_38_9
hsa-miR-6833-5p tccTCCACAagcctc GUGUGGAA m6b Disrupted HHFCT_125903_uc010jip.1_38_9

Mutation Mutation ID Sample Name Cancer Type
chr5:g.158708135C>A COSM3853248 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3188 cacAAGCCTCccctc AGAGGCUU m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-6825-5p cacaagCCTCCCCtc UGGGGAGG m7b Disrupted HHFCT_125903_uc010jip.1_38_9

Mutation Mutation ID Sample Name Cancer Type
chr5:g.158708125A>C COSM1486548 TCGA-D8-A1JP-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1205 ccctccaCCTGCAGc UCUGCAGG m7b Created HHFCT_125903_uc010jip.1_38_9
hsa-miR-17-3p ccctccaACTGCAGc ACUGCAGU m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-3665 ccctcCACCTGCagc AGCAGGUG m7b Created HHFCT_125903_uc010jip.1_38_9
hsa-miR-6515-5p CCCTCCAActgcagc UUGGAGGG m8a Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-657 ccctccACCTGCagc GGCAGGUU m6b Created HHFCT_125903_uc010jip.1_38_9
hsa-miR-6880-5p ccCTCCACCtgcagc UGGUGGAG m7b (m6b->m7b) HHFCT_125903_uc010jip.1_38_9
hsa-miR-764 ccctcCACCTGCagc GCAGGUGC m7a Created HHFCT_125903_uc010jip.1_38_9
hsa-miR-7847-3p cCCTCCACctgcagc CGUGGAGG m7b Created HHFCT_125903_uc010jip.1_38_9

Mutation Mutation ID Sample Name Cancer Type
chr5:g.158708116G>A COSM4927660 TCGA-G3-A7M6-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-28-5p tgcagcAGCTCCTcg AAGGAGCU m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-3139 tgcagcAGCTCCTcg UAGGAGCU m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-558 tgcaGCAGCTCctcg UGAGCUGC m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-708-5p tgcagcAGCTCCTcg AAGGAGCU m7b Disrupted HHFCT_125903_uc010jip.1_38_9

Mutation Mutation ID Sample Name Cancer Type
chr5:g.158708105A>G COSM3738289 SJRHB036A [soft_tissue][striated_muscle][rhabdomyosarcoma][alveolar]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6786-3p ctcGGGCGTCttctc UGACGCCC m7b Created HHFCT_125903_uc010jip.1_38_9

Mutation Mutation ID Sample Name Cancer Type
chr5:g.158708103C>A COSM1065102 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 cgggcaTCTTCTCct AGAGAAGA m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-4434 cgggcatCTTCTCCt AGGAGAAG m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-4516 cgggcatCTTCTCCt GGGAGAAG m7b Disrupted HHFCT_125903_uc010jip.1_38_9
hsa-miR-5703 cgggcatCTTCTCCt AGGAGAAG m7b Disrupted HHFCT_125903_uc010jip.1_38_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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