SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0072039
Gene Symbol: DROSHA
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410789G>A COSM3014369 SW1463 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2682-3p ccAAGAGGCctgtgg CGCCUCUU m7b (m7b->m6b) HHFCT_121865_cluster-18520_5_31
hsa-miR-4650-5p ccaagAGGCCTGtgg UCAGGCCU m7b Disrupted HHFCT_121865_cluster-18520_5_31
hsa-miR-4757-5p ccaAGAGGCCTgtgg AGGCCUCU m8a Disrupted HHFCT_121865_cluster-18520_5_31
hsa-miR-6744-3p ccaAGAGGCCtgtgg GGGCCUCU m7b Disrupted HHFCT_121865_cluster-18520_5_31
hsa-miR-6781-3p ccAAGAGGCctgtgg UGCCUCUU m7b (m7b->m6b) HHFCT_121865_cluster-18520_5_31

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410780G>A COSM4679390 T3446 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p ctGTGGCACttcgca CGUGCCAC m7b (m6b->m7b) HHFCT_121865_cluster-18520_5_31
hsa-miR-7706 ctgtgGCGCTTCgca UGAAGCGC m7b Disrupted HHFCT_121865_cluster-18520_5_31

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410778T>G COSM3661782 BN05 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7706 gtgGCGCTTCgcacc UGAAGCGC m7b Disrupted HHFCT_121865_cluster-18520_5_31

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410776C>T COSM3014367 CCK81 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-3p ggcgcTTTGCACcaa UGUGCAAA m7b Created HHFCT_121865_cluster-18520_5_31
hsa-miR-19b-3p ggcgcTTTGCACcaa UGUGCAAA m7b Created HHFCT_121865_cluster-18520_5_31
hsa-miR-330-3p ggcGCTTTGCaccaa GCAAAGCA m7a Created HHFCT_121865_cluster-18520_5_31
hsa-miR-4466 ggcgcttCGCACCaa GGGUGCGG m6b Disrupted HHFCT_121865_cluster-18520_5_31
hsa-miR-518a-3p gGCGCTTTgcaccaa GAAAGCGC m7b Created HHFCT_121865_cluster-18520_5_31
hsa-miR-518a-5p ggcgCTTTGCAccaa CUGCAAAG m7b Created HHFCT_121865_cluster-18520_5_31
hsa-miR-518b gGCGCTTTGcaccaa CAAAGCGC m8a (m7a->m8a) HHFCT_121865_cluster-18520_5_31
hsa-miR-518c-3p gGCGCTTTGcaccaa CAAAGCGC m8a (m7a->m8a) HHFCT_121865_cluster-18520_5_31
hsa-miR-518d-3p gGCGCTTTGcaccaa CAAAGCGC m8a (m7a->m8a) HHFCT_121865_cluster-18520_5_31
hsa-miR-518f-3p gGCGCTTTgcaccaa GAAAGCGC m7b Created HHFCT_121865_cluster-18520_5_31
hsa-miR-527 ggcgCTTTGCAccaa CUGCAAAG m7b Created HHFCT_121865_cluster-18520_5_31
hsa-miR-675-5p ggcgcttCGCACCAa UGGUGCGG m7a Disrupted HHFCT_121865_cluster-18520_5_31
hsa-miR-7706 gGCGCTTCgcaccaa UGAAGCGC m7b Disrupted HHFCT_121865_cluster-18520_5_31

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410767A>T COSM3014366 HT55 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8083 caccAAGTCCTtggc CAGGACUU m7b Created HHFKP_112706_cluster-18520_6_242

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410765C>T COSM3615355 TCGA-EE-A2MT-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1264 ccAAGACTTtggcgg CAAGUCUU m7b (m6b->m7b) HHFKP_112706_cluster-18520_6_242

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410760C>T COSM1436988 TCGA-F4-6703-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6084 acctTGGCGGAcctt UUCCGCCA m7b Disrupted HHFKP_112706_cluster-18520_6_242

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31410729T>G COSN9432476 AOCS-085-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3925-5p acacactGTTCTCTc AAGAGAAC m7b Created HHFKP_112706_cluster-18520_6_242
hsa-miR-4302 aCACACTGttctctc CCAGUGUG m7b Created HHFKP_112706_cluster-18520_6_242
hsa-miR-4773 acacaCTGTTCTctc CAGAACAG m7b Created HHFKP_112706_cluster-18520_6_242
hsa-miR-548az-5p acaCACTTTTctctc CAAAAGUG m7b Disrupted HHFKP_112706_cluster-18520_6_242
hsa-miR-548t-5p acaCACTTTTctctc CAAAAGUG m7b Disrupted HHFKP_112706_cluster-18520_6_242
hsa-miR-595 aCACACTTttctctc GAAGUGUG m7b Disrupted HHFKP_112706_cluster-18520_6_242

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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