SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0072035
Gene Symbol: DROSHA
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.31409319G>T COSM4619853 C80 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4797-5p ttgcagCTCTGTaca GACAGAGU m6b Created HHFKP_112705_cluster-18520_5_113
hsa-miR-558 ttGCAGCTCtgtaca UGAGCUGC m7b (m6b->m7b) HHFKP_112705_cluster-18520_5_113

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31405711G>A COSM3014360 TCGA-EE-A29V-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-718 agcaaGCGGAAatgg CUUCCGCC m6b Disrupted HHFCT_121864_cluster-18520_4_32
hsa-miR-544a agcaaGCAGAAatgg AUUCUGCA m6b Created HHFCT_121864_cluster-18520_4_32
hsa-miR-572 agcaAGCGGAaatgg GUCCGCUC m6b Disrupted HHFCT_121864_cluster-18520_4_32
hsa-miR-6071 agcaAGCAGAAatgg UUCUGCUG m7a Created HHFCT_121864_cluster-18520_4_32
hsa-miR-6738-3p agcaaGCAGAAatgg CUUCUGCC m6b Created HHFCT_121864_cluster-18520_4_32
hsa-miR-6828-3p agcaAGCAGAaatgg AUCUGCUC m6b Created HHFCT_121864_cluster-18520_4_32

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31405700C>G COSM3721572 575 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7106-3p atGGGAGCagcaatg AGCUCCCU m6b Disrupted HHFCT_121864_cluster-18520_4_32
hsa-miR-4268 atggGAGGAGCaatg GGCUCCUC m7b Created HHFCT_121864_cluster-18520_4_32
hsa-miR-4448 atgggAGGAGCaatg GGCUCCUU m6b Created HHFCT_121864_cluster-18520_4_32
hsa-miR-6772-3p atgggAGGAGCAAtg UUGCUCCU m8a Created HHFCT_121864_cluster-18520_4_32
hsa-miR-6749-3p atGGGAGGAGcaatg CUCCUCCC m8a Created HHFCT_121864_cluster-18520_4_32

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31405698G>A COSM4961160 CHC892T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-744-3p gggaGCAACAatgga CUGUUGCC m6b Created HHFCT_121864_cluster-18520_4_32

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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