SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_013235
Gene Symbol: DROSHA
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401533C>T COSM280610 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255b-2-3p tcagAAGTGGTTcat AACCACUU m8a Created HHFKP_112703_cluster-18520_3_44
Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401532G>T COSM592194 TCGA-38-4629-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401532G>A COSM3014357 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203b-3p cagaagCAGTTCAtc UUGAACUG m7b Created HHFKP_112703_cluster-18520_3_44
Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401525C>T COSM3615354 TCGA-EE-A2MJ-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401520G>A COSM3854663 TCGA-HU-8602-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-5p atcgAACGGAagtac CUCCGUUU m6b Disrupted HHFKP_112703_cluster-18520_3_44
hsa-miR-26b-3p atcGAACAGaagtac CCUGUUCU m6b Created HHFKP_112703_cluster-18520_3_44
hsa-miR-3182 atcgaACAGAAGtac GCUUCUGU m7b Created HHFKP_112703_cluster-18520_3_44
hsa-miR-3682-5p atcgaacAGAAGTAc CUACUUCU m7b Created HHFKP_112703_cluster-18520_3_44
hsa-miR-4652-3p atcgAACAGAAgtac GUUCUGUU m7b Created HHFKP_112703_cluster-18520_3_44

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401518GGA>AAA COSM4517718 CSCC-40-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-5p atcgAACGGAagtacag CUCCGUUU m6b Disrupted HHFKP_112703_cluster-18520_3_44
hsa-miR-375 atCGAACAAAagtacag UUUGUUCG m8a Created HHFKP_112703_cluster-18520_3_44
hsa-miR-6739-3p atcGAACAAaagtacag AUUGUUCU m6b Created HHFKP_112703_cluster-18520_3_44

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401468G>T COSM337946 LUAD-D01603 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-526b-5p aTCAAGAGagagagc CUCUUGAG m7a Disrupted HHFKP_112702_cluster-18520_2_14
hsa-miR-6873-3p atcaagAGAGAGAgc UUCUCUCU m7b Disrupted HHFKP_112702_cluster-18520_2_14
hsa-miR-7110-3p atcaaGAGAGAGAgc UCUCUCUC m8a Disrupted HHFKP_112702_cluster-18520_2_14

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401345A>G COSN6293988 RK162_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1208 gcagACAGTGAatga UCACUGUU m7a Created HHFCT_121863_cluster-18520_2_34
hsa-miR-181b-2-3p gcagaCAGTGAatga CUCACUGA m6b Created HHFCT_121863_cluster-18520_2_34
hsa-miR-181b-3p gcagaCAGTGAatga CUCACUGA m6b Created HHFCT_121863_cluster-18520_2_34
hsa-miR-3120-5p gCAGACAGtgaatga CCUGUCUG m7b Created HHFCT_121863_cluster-18520_2_34
hsa-miR-4289 gcagACAATGaatga GCAUUGUG m6b Disrupted HHFCT_121863_cluster-18520_2_34
hsa-miR-4420 gcagaCAGTGAatga GUCACUGA m6b Created HHFCT_121863_cluster-18520_2_34
hsa-miR-664a-3p gcagacAATGAATga UAUUCAUU m7b Disrupted HHFCT_121863_cluster-18520_2_34
hsa-miR-6760-3p gcaGACAGTGaatga ACACUGUC m7b Created HHFCT_121863_cluster-18520_2_34
hsa-miR-1208 gcagACAGTGAatga UCACUGUU m7a Created HHFKP_112701_cluster-18520_1_310
hsa-miR-181b-2-3p gcagaCAGTGAatga CUCACUGA m6b Created HHFKP_112701_cluster-18520_1_310
hsa-miR-181b-3p gcagaCAGTGAatga CUCACUGA m6b Created HHFKP_112701_cluster-18520_1_310
hsa-miR-3120-5p gCAGACAGtgaatga CCUGUCUG m7b Created HHFKP_112701_cluster-18520_1_310
hsa-miR-4289 gcagACAATGaatga GCAUUGUG m6b Disrupted HHFKP_112701_cluster-18520_1_310
hsa-miR-4420 gcagaCAGTGAatga GUCACUGA m6b Created HHFKP_112701_cluster-18520_1_310
hsa-miR-664a-3p gcagacAATGAATga UAUUCAUU m7b Disrupted HHFKP_112701_cluster-18520_1_310
hsa-miR-6760-3p gcaGACAGTGaatga ACACUGUC m7b Created HHFKP_112701_cluster-18520_1_310

Mutation Mutation ID Sample Name Cancer Type
chr5:g.31401176T>C COSN5160688 PD3945a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 tGCTCTTTAaataat UAAAGAGC m8a (m8a->m7a) HHKTA_12065_NM_013235|4718|4757|5.58156439567667|1.14704153598181
hsa-miR-4709-3p tgCTCTTCAAataat UUGAAGAG m8a Created HHKTA_12065_NM_013235|4718|4757|5.58156439567667|1.14704153598181

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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