SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0088472
Gene Symbol: DENND1A
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr9:g.123667041C>A COSM1284460 TARGET-30-PASXNN [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4728-3p aacttccCAGCATac CAUGCUGA m6b Disrupted HHFCT_158765_cluster-23529_83_7
hsa-miR-4747-5p aaCTTCCCagcatac AGGGAAGG m6b Disrupted HHFCT_158765_cluster-23529_83_7
hsa-miR-5196-5p aaCTTCCCagcatac AGGGAAGG m6b Disrupted HHFCT_158765_cluster-23529_83_7
hsa-miR-5589-5p aacttCCCAGCatac GGCUGGGU m6b Disrupted HHFCT_158765_cluster-23529_83_7
hsa-miR-619-5p aactTCCCAGCatac GCUGGGAU m7a Disrupted HHFCT_158765_cluster-23529_83_7
hsa-miR-204-3p aacTTCCCAGCatac GCUGGGAA m8a Disrupted HHFCT_158765_cluster-23529_83_7
hsa-miR-4646-5p aacTTCCCAGcatac ACUGGGAA m7b Disrupted HHFCT_158765_cluster-23529_83_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser