SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0088458
Gene Symbol: DENND1A
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.123929488G>A COSN2310211 RK189_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1537-5p agaggTTACAGCctg AGCUGUAA m7b Created HHFCT_158830_cluster-23529_149_15
hsa-miR-4772-3p agagGTTGCAGcctg CCUGCAAC m7b Disrupted HHFCT_158830_cluster-23529_149_15

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123929165A>C COSN5697514 RK298_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4666a-5p ttgatACATGTAact AUACAUGU m7b Disrupted HHFCT_158829_cluster-23529_148_20
hsa-miR-552-3p ttgatACCTGTaact AACAGGUG m6b Created HHFCT_158829_cluster-23529_148_20
hsa-miR-7151-3p ttgataCCTGTAact CUACAGGC m6b Created HHFCT_158829_cluster-23529_148_20

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123626073A>C COSN9277393 C0052T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-3p tctCCACAGaaaaaa CCUGUGGG m6b Disrupted HHFCT_158757_cluster-23529_75_8
hsa-miR-4652-3p tctccACAGAAaaaa GUUCUGUU m6b Disrupted HHFCT_158757_cluster-23529_75_8
hsa-miR-4743-3p tctccACAGAAAaaa UUUCUGUC m7a Disrupted HHFCT_158757_cluster-23529_75_8
hsa-miR-6786-5p tctCCACCGaaaaaa GCGGUGGG m6b Created HHFCT_158757_cluster-23529_75_8
hsa-miR-7114-5p tcTCCACAGAaaaaa UCUGUGGA m8a Disrupted HHFCT_158757_cluster-23529_75_8
hsa-miR-8071 tcTCCACCGaaaaaa CGGUGGAC m7a (m6a->m7a) HHFCT_158757_cluster-23529_75_8
Mutation Mutation ID Sample Name Cancer Type
chr9:g.123616536T>A COSN7556152 8033414 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.123616521C>T COSN2310142 RK006_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p aaatattTATATAaa CUAUAUAU m6b Created HHRBC_13402_BC3-2of3-SCL_3710
hsa-miR-410-3p aaatatTTATATaaa AAUAUAAC m6b Created HHRBC_13402_BC3-2of3-SCL_3710
hsa-miR-190a-3p aaatattTATATAaa CUAUAUAU m6b Created HHRBC_13402_BC3-2of3-SCL_3710
hsa-miR-410-3p aaatatTTATATaaa AAUAUAAC m6b Created HHRBC_13402_BC3-2of3-SCL_3710

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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