SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0088443
Gene Symbol: DENND1A
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.123541393G>A COSN5119042 HX22T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p ttaTCCCGGGttgat CCCCGGGA m7b Disrupted HHFKP_146501_cluster-23529_25_41
hsa-miR-4714-3p ttatcccAGGTTGat CCAACCUA m6b Created HHFKP_146501_cluster-23529_25_41
hsa-miR-490-3p ttatcCCAGGTTGat CAACCUGG m8a Created HHFKP_146501_cluster-23529_25_41
hsa-miR-619-5p ttATCCCAGgttgat GCUGGGAU m7b (m6b->m7b) HHFKP_146501_cluster-23529_25_41
hsa-miR-6506-5p ttATCCCAGgttgat ACUGGGAU m7b (m6b->m7b) HHFKP_146501_cluster-23529_25_41
hsa-miR-7851-3p ttatCCCAGGTtgat UACCUGGG m7b Created HHFKP_146501_cluster-23529_25_41

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123478413G>A COSN9699599 AOCS-119-3-9 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-3p tttCCCAGGAaccag CUCCUGGG m7b Disrupted HHFKP_146494_cluster-23529_18_8
hsa-miR-152-5p tttcccaAGAACCag AGGUUCUG m6b Created HHFKP_146494_cluster-23529_18_8
hsa-miR-204-3p tTTCCCAGgaaccag GCUGGGAA m7b Disrupted HHFKP_146494_cluster-23529_18_8
hsa-miR-2116-5p tttcccAAGAACCag GGUUCUUA m7a Created HHFKP_146494_cluster-23529_18_8
hsa-miR-218-1-3p tttcccaGGAACCAg AUGGUUCC m7b Disrupted HHFKP_146494_cluster-23529_18_8
hsa-miR-450a-1-3p tTTCCCAAgaaccag AUUGGGAA m7b Created HHFKP_146494_cluster-23529_18_8
hsa-miR-635 tttCCCAAGaaccag ACUUGGGC m6b Created HHFKP_146494_cluster-23529_18_8
hsa-miR-6742-3p tttCCCAGGaaccag ACCUGGGU m6b Disrupted HHFKP_146494_cluster-23529_18_8
hsa-miR-6774-5p tttCCCAAGaaccag ACUUGGGC m6b Created HHFKP_146494_cluster-23529_18_8
hsa-miR-6783-3p tttCCCAGGAAccag UUCCUGGG m8a Disrupted HHFKP_146494_cluster-23529_18_8
hsa-miR-6852-5p tttCCCAGGaaccag CCCUGGGG m6b Disrupted HHFKP_146494_cluster-23529_18_8
hsa-miR-887-5p ttTCCCAAGaaccag CUUGGGAG m7a (m6a->m7a) HHFKP_146494_cluster-23529_18_8
hsa-miR-939-3p tttCCCAGGaaccag CCCUGGGC m6b Disrupted HHFKP_146494_cluster-23529_18_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123457865C>T COSM4676959 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser