SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_020946
Gene Symbol: DENND1A
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.123382303G>A COSM131411 HCC13T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1908-5p attCCCCGCCcggcc CGGCGGGG m7b Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-2110 aTTCCCCAcccggcc UUGGGGAA m7b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4706 atTCCCCGCccggcc AGCGGGGA m7b (m7b->m6b) HHFKP_146480_cluster-23529_4_50
hsa-miR-4749-5p atTCCCCGCccggcc UGCGGGGA m7b (m7b->m6b) HHFKP_146480_cluster-23529_4_50
hsa-miR-491-5p atTCCCCACccggcc AGUGGGGA m7b (m6b->m7b) HHFKP_146480_cluster-23529_4_50
hsa-miR-663a attCCCCGCCcggcc AGGCGGGG m7b Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-6756-5p attcCCCACCCggcc AGGGUGGG m7b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-6766-5p attcCCCACCCGgcc CGGGUGGG m8a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-6787-5p attCCCCGCCcggcc UGGCGGGG m7b Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-92a-2-5p attCCCCACCCggcc GGGUGGGG m8a Created HHFKP_146480_cluster-23529_4_50

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123382301C>A COSM4802786 BCM695T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1908-5p tCCCCGCCcggccaa CGGCGGGG m7b Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-4743-5p tccccgcCCGGCCAa UGGCCGGA m7a Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-4749-5p TCCCCGCAcggccaa UGCGGGGA m8a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-6787-5p tCCCCGCCcggccaa UGGCGGGG m7b Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-1908-5p tCCCCGCCcggccaa CGGCGGGG m7b Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-4743-5p tccccgcCCGGCCAa UGGCCGGA m7a Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-4749-5p TCCCCGCAcggccaa UGCGGGGA m8a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-6787-5p tCCCCGCCcggccaa UGGCGGGG m7b Disrupted HHFKP_146480_cluster-23529_4_50

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123382299G>A COSM4775597 SJHYPO032 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3652 cccgcCCAGCCaagc CGGCUGGA m6b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4430 cccgcCCAGCCaagc AGGCUGGA m6b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4486 ccCGCCCAGCcaagc GCUGGGCG m8a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4505 cccgCCCAGCCaagc AGGCUGGG m7b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4743-5p cccgcCCGGCCAagc UGGCCGGA m7a Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-5589-5p cccgCCCAGCCaagc GGCUGGGU m7a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-5787 cccgCCCAGCCaagc GGGCUGGG m7b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-647 cccgccCAGCCAagc GUGGCUGC m6b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-6842-3p cccgcCCAGCCAAgc UUGGCUGG m8a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-1228-5p cCCGCCCAgccaagc GUGGGCGG m7b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-3652 cccgcCCAGCCaagc CGGCUGGA m6b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4430 cccgcCCAGCCaagc AGGCUGGA m6b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4486 ccCGCCCAGCcaagc GCUGGGCG m8a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4505 cccgCCCAGCCaagc AGGCUGGG m7b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-4743-5p cccgcCCGGCCAagc UGGCCGGA m7a Disrupted HHFKP_146480_cluster-23529_4_50
hsa-miR-5589-5p cccgCCCAGCCaagc GGCUGGGU m7a Created HHFKP_146480_cluster-23529_4_50
hsa-miR-5787 cccgCCCAGCCaagc GGGCUGGG m7b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-647 cccgccCAGCCAagc GUGGCUGC m6b Created HHFKP_146480_cluster-23529_4_50
hsa-miR-6842-3p cccgcCCAGCCAAgc UUGGCUGG m8a Created HHFKP_146480_cluster-23529_4_50

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123381563C>A COSM607377 TCGA-44-6144-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-5p ctctgcTCCTCAaca GUGAGGAC m6b Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-3150b-3p ctctgCTCCTCAaca UGAGGAGA m7a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-4689 ctctgCTCCTCAAca UUGAGGAG m8a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-4784 ctctgCTCCTCAaca UGAGGAGA m7a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-6081 ctCTGCTCCTcaaca AGGAGCAG m8a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-6858-5p ctctgCTCCTCAaca GUGAGGAG m7b Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-6869-5p ctctgCTACTCAaca GUGAGUAG m7b Created HHFKP_146477_cluster-23529_1_30
hsa-miR-1224-5p ctctgcTCCTCAaca GUGAGGAC m6b Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-3150b-3p ctctgCTCCTCAaca UGAGGAGA m7a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-4689 ctctgCTCCTCAAca UUGAGGAG m8a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-4784 ctctgCTCCTCAaca UGAGGAGA m7a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-6081 ctCTGCTCCTcaaca AGGAGCAG m8a Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-6858-5p ctctgCTCCTCAaca GUGAGGAG m7b Disrupted HHFKP_146477_cluster-23529_1_30
hsa-miR-6869-5p ctctgCTACTCAaca GUGAGUAG m7b Created HHFKP_146477_cluster-23529_1_30

Mutation Mutation ID Sample Name Cancer Type
chr9:g.123381166G>A COSN5864127
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1323 ttgattgAGTTTTGc UCAAAACU m7b Created HHRBL_15009_BCBL1-2of3-SCL_3403
hsa-miR-548as-3p ttgattGGGTTTTgc UAAAACCC m7b Disrupted HHRBL_15009_BCBL1-2of3-SCL_3403
hsa-miR-548o-3p ttgattgAGTTTTGc CCAAAACU m7b Created HHRBL_15009_BCBL1-2of3-SCL_3403

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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