SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0027711
Gene Symbol: DCN
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.91178551T>C COSM232133 LAU108 [skin][arm][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p taaatcATGAAGGcc UCCUUCAU m7b Disrupted HHFKP_32738_cluster-5691_1_16
hsa-miR-433-3p taaATCATGAaggcc AUCAUGAU m7b Disrupted HHFKP_32738_cluster-5691_1_16

Mutation Mutation ID Sample Name Cancer Type
chr12:g.91178550G>A COSM3466388 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p aaatcATGAAGGcca UCCUUCAU m7b Disrupted HHFKP_32738_cluster-5691_1_16
hsa-miR-433-3p aaATCATGAaggcca AUCAUGAU m7b (m7b->m6b) HHFKP_32738_cluster-5691_1_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser