SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0047681
Gene Symbol: CXXC1
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286609T>C COSM1494160 TCGA-B0-5098-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286234C>T COSM2879338 TCGA-EE-A3AD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216b-5p AGAGATTTgctatcg AAAUCUCU m8a Created HHFKP_66619_cluster-11038_5_8
hsa-miR-4762-5p agAGATTTGctatcg CCAAAUCU m7b (m6b->m7b) HHFKP_66619_cluster-11038_5_8

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286192C>T COSM2879337 LOVO [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3156-3p caatgAGTGGGAcag CUCCCACU m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4433a-5p caatgaGTGGGACag CGUCCCAC m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4433b-5p caatgagTGGGACAg AUGUCCCA m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4449 caatgagCGGGACag CGUCCCGG m6b Disrupted HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-3156-3p caatgAGTGGGAcag CUCCCACU m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4433a-5p caatgaGTGGGACag CGUCCCAC m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4433b-5p caatgagTGGGACAg AUGUCCCA m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4449 caatgagCGGGACag CGUCCCGG m6b Disrupted HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286174C>T COSM3526243 TCGA-EB-A5UM-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p tgagcCCCGGGatga CCCCGGGA m6b Disrupted HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-1915-3p tgagCCCTGGGatga CCCCAGGG m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4283 tGAGCCCCgggatga UGGGGCUC m7b Disrupted HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4508 tgAGCCCCGggatga GCGGGGCU m7b (m7b->m6b) HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4532 tgagCCCCGGGatga CCCCGGGG m7b Disrupted HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4685-5p tgaGCCCTGGGatga CCCAGGGC m8a Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4726-3p tgagcCCTGGGatga ACCCAGGU m6b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-5088-5p tGAGCCCTGggatga CAGGGCUC m8a (m7a->m8a) HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6764-5p tgagCCCTGGGAtga UCCCAGGG m8a Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6784-5p tgaGCCCCGGgatga GCCGGGGC m7b Disrupted HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6837-5p tgaGCCCTGGgatga ACCAGGGC m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6840-3p tgagcCCTGGGatga GCCCAGGA m6b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-1247-3p tgagcCCCGGGatga CCCCGGGA m6b Disrupted HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-1915-3p tgagCCCTGGGatga CCCCAGGG m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4283 tGAGCCCCgggatga UGGGGCUC m7b Disrupted HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4508 tgAGCCCCGggatga GCGGGGCU m7b (m7b->m6b) HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4532 tgagCCCCGGGatga CCCCGGGG m7b Disrupted HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4685-5p tgaGCCCTGGGatga CCCAGGGC m8a Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4726-3p tgagcCCTGGGatga ACCCAGGU m6b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-5088-5p tGAGCCCTGggatga CAGGGCUC m8a (m7a->m8a) HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6764-5p tgagCCCTGGGAtga UCCCAGGG m8a Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6784-5p tgaGCCCCGGgatga GCCGGGGC m7b Disrupted HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6837-5p tgaGCCCTGGgatga ACCAGGGC m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6840-3p tgagcCCTGGGatga GCCCAGGA m6b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286159G>A COSM4072479 TCGA-BR-A4J7-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4290 gggtGGAGGGCgcaa UGCCCUCC m7b Disrupted HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4297 gggtGGAAGGCgcaa UGCCUUCC m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-5581-5p gggtGGAAGGCgcaa AGCCUUCC m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-668-5p gggtggaAGGCGCAa UGCGCCUC m7a Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6720-3p gggtggaAGGCGCaa CGCGCCUG m6b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6880-3p gggtgGAAGGCGcaa CCGCCUUC m7b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4290 gggtGGAGGGCgcaa UGCCCUCC m7b Disrupted HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4297 gggtGGAAGGCgcaa UGCCUUCC m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-5581-5p gggtGGAAGGCgcaa AGCCUUCC m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-668-5p gggtggaAGGCGCAa UGCGCCUC m7a Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6720-3p gggtggaAGGCGCaa CGCGCCUG m6b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6880-3p gggtgGAAGGCGcaa CCGCCUUC m7b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286156C>T COSM2879336 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4290 tGGAGGGCgcaagag UGCCCUCC m7b Disrupted HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-500a-3p tggagGGTGCAagag AUGCACCU m6b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6865-3p tgGAGGGTGcaagag ACACCCUC m7b (m6b->m7b) HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4290 tGGAGGGCgcaagag UGCCCUCC m7b Disrupted HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-500a-3p tggagGGTGCAagag AUGCACCU m6b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-6865-3p tgGAGGGTGcaagag ACACCCUC m7b (m6b->m7b) HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286155G>A COSM1303767 TCGA-BT-A2LD-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4290 GGAGGGCAcaagagg UGCCCUCC m8a Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-550b-2-5p ggagGGCACAagagg AUGUGCCU m6b Created HHHNA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-4290 GGAGGGCAcaagagg UGCCCUCC m8a Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402
hsa-miR-550b-2-5p ggagGGCACAagagg AUGUGCCU m6b Created HHHSA_11118_CXXC1|NM_001101654|exon_CDS|-3.74219255652181|0.899037071460402

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286108G>T COSM4072478 TCGA-CG-5726-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-345-3p agggTCAGGGacagg GCCCUGAA m6b Disrupted HPRO6_36733_G43513.1_47812472
hsa-miR-3912-5p agggtcATGGACAgg AUGUCCAU m7b Created HPRO6_36733_G43513.1_47812472
hsa-miR-4732-3p aggGTCAGGGacagg GCCCUGAC m7b Disrupted HPRO6_36733_G43513.1_47812472
hsa-miR-4750-3p aGGGTCAGGgacagg CCUGACCC m8a (m8a->m7a) HPRO6_36733_G43513.1_47812472
hsa-miR-670-5p agggTCAGGGACagg GUCCCUGA m8a Disrupted HPRO6_36733_G43513.1_47812472

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50284544C>T COSM4597929 UM-SCC-11B [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4252 atacaAGTGGCatcg GGCCACUG m6b Created HPRO6_36732_G43512.1_47810908
hsa-miR-643 ATACAAGTggcatcg ACUUGUAU m8a Created HPRO6_36732_G43512.1_47810908
hsa-miR-6500-3p atACAAGTGgcatcg ACACUUGU m7b (m6b->m7b) HPRO6_36732_G43512.1_47810908
hsa-miR-6743-3p atacaAGCGGCatcg AGCCGCUC m6b Disrupted HPRO6_36732_G43512.1_47810908

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50283799G>T COSM1711335 YUSEL [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-513b-3p ggTGACATTgatgac AAAUGUCA m7b (m6b->m7b) HHFKP_66617_cluster-11038_3_8
hsa-miR-6760-3p ggtGACAGTGatgac ACACUGUC m7b Disrupted HHFKP_66617_cluster-11038_3_8
hsa-miR-6773-3p gGTGACAGTgatgac ACUGUCAC m8a (m8a->m7a) HHFKP_66617_cluster-11038_3_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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