SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0047680
Gene Symbol: CXXC1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282687T>C COSM988856 TCGA-B5-A11G-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4440 acagCCACGACAaac UGUCGUGG m8a Created HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-4440 acagCCACGACAaac UGUCGUGG m8a Created HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282677C>T COSM988855 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1471 caaaccgCGCGGGat GCCCGCGU m6b Disrupted HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-579-5p caAACCGCGcgggat UCGCGGUU m7b (m7b->m6b) HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-1471 caaaccgCGCGGGat GCCCGCGU m6b Disrupted HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-579-5p caAACCGCGcgggat UCGCGGUU m7b (m7b->m6b) HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282676G>A COSM988854 TCGA-D1-A101-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1471 aaaccgCGCGGGatt GCCCGCGU m6b Disrupted HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-579-5p aAACCGCGcgggatt UCGCGGUU m7b Disrupted HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-1471 aaaccgCGCGGGatt GCCCGCGU m6b Disrupted HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-579-5p aAACCGCGcgggatt UCGCGGUU m7b Disrupted HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282675C>T COSM239498 WA16 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1471 aaccgCGCGGGattg GCCCGCGU m6b Disrupted HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-3186-3p aaCCGCGTGggattg UCACGCGG m7b (m6b->m7b) HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-1471 aaccgCGCGGGattg GCCCGCGU m6b Disrupted HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-3186-3p aaCCGCGTGggattg UCACGCGG m7b (m6b->m7b) HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282674G>T COSM3672680 TCGA-G9-6342-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1471 accgCGCGGGattgc GCCCGCGU m6b Disrupted HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-4738-5p accGCGCTGGattgc ACCAGCGC m7b Created HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-5586-5p accgcGCTGGATtgc UAUCCAGC m7b Created HHHNE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-1471 accgCGCGGGattgc GCCCGCGU m6b Disrupted HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-4738-5p accGCGCTGGattgc ACCAGCGC m7b Created HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
hsa-miR-5586-5p accgcGCTGGATtgc UAUCCAGC m7b Created HHHSE_4403_CXXC1|NM_001101654|exon_CDS|-4.94103399711382|0.501296825414955
Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282606G>T COSM4620063 C84 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282602C>T COSM473897 TCGA-BP-4961-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-383-3p ccAGTGCTGaccgct ACAGCACU m7b (m6b->m7b) HHFKP_66616_cluster-11038_2_8

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282598C>T COSM3526239 TCGA-EE-A2M8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p tgccgaCTGCTGagc ACAGCAGG m6b Created HHFKP_66616_cluster-11038_2_8
hsa-miR-4274 tgccGACTGCTGagc CAGCAGUC m8a Created HHFKP_66616_cluster-11038_2_8
hsa-miR-4291 tgccgaCTGCTGAgc UUCAGCAG m7b Created HHFKP_66616_cluster-11038_2_8
hsa-miR-4519 tgccgACTGCTGagc CAGCAGUG m7a Created HHFKP_66616_cluster-11038_2_8
hsa-miR-761 tgccgaCTGCTGagc GCAGCAGG m6b Created HHFKP_66616_cluster-11038_2_8
hsa-miR-922 tgccgaCTGCTGagc GCAGCAGA m6b Created HHFKP_66616_cluster-11038_2_8

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50282502C>T COSN1082139 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3919 gtTTCTCTGgttctc GCAGAGAA m7b (m6b->m7b) HHFKP_66615_cluster-11038_1_8
hsa-miR-3919 gtTTCTCTGgttctc GCAGAGAA m7b (m6b->m7b) HPRO6_36730_G43509.1_47808859
hsa-miR-3919 gtTTCTCTGgttctc GCAGAGAA m7b (m6b->m7b) HPSD3_4819_G6402.1_47808877
hsa-miR-3919 gtTTCTCTGgttctc GCAGAGAA m7b (m6b->m7b) HHFKP_66615_cluster-11038_1_8
hsa-miR-3919 gtTTCTCTGgttctc GCAGAGAA m7b (m6b->m7b) HPRO6_36730_G43509.1_47808859
hsa-miR-3919 gtTTCTCTGgttctc GCAGAGAA m7b (m6b->m7b) HPSD3_4819_G6402.1_47808877

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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