SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000396
Gene Symbol: CTSK
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.150806758G>T COSM675526 TCGA-85-6561-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4797-5p ttgCTCTGTaccctg GACAGAGU m6b Disrupted HHFCT_4921_cluster-1793_2_6
hsa-miR-1276 ttGCTCTTTAccctg UAAAGAGC m8a Created HHFCT_4921_cluster-1793_2_6
hsa-miR-4311 ttgCTCTTTaccctg GAAAGAGA m6b Created HHFCT_4921_cluster-1793_2_6
hsa-miR-583 ttgCTCTTTaccctg CAAAGAGG m6b Created HHFCT_4921_cluster-1793_2_6
hsa-miR-6501-3p tTGCTCTGtaccctg CCAGAGCA m7b Disrupted HHFCT_4921_cluster-1793_2_6
hsa-miR-6841-5p ttgctctGTACCCTg UAGGGUAC m7b Disrupted HHFCT_4921_cluster-1793_2_6
hsa-miR-4797-5p ttgCTCTGTaccctg GACAGAGU m6b Disrupted HHFCT_4921_cluster-1793_2_6
hsa-miR-1276 ttGCTCTTTAccctg UAAAGAGC m8a Created HHFCT_4921_cluster-1793_2_6
hsa-miR-4311 ttgCTCTTTaccctg GAAAGAGA m6b Created HHFCT_4921_cluster-1793_2_6
hsa-miR-583 ttgCTCTTTaccctg CAAAGAGG m6b Created HHFCT_4921_cluster-1793_2_6
hsa-miR-6501-3p tTGCTCTGtaccctg CCAGAGCA m7b Disrupted HHFCT_4921_cluster-1793_2_6
hsa-miR-6841-5p ttgctctGTACCCTg UAGGGUAC m7b Disrupted HHFCT_4921_cluster-1793_2_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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