SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0074486
Gene Symbol: CSNK1A1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.149513179A>G COSM239463 WA18 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-5p ggccAAAGAGTacag ACUCUUUC m7a Created HHKTB_2284_NM_001025105|1051|1090|39.3664895865275|1.78837287533242

Mutation Mutation ID Sample Name Cancer Type
chr5:g.149513112C>T COSM1064173 LS180 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3181 ggcactGCCCGATat AUCGGGCC m7a Disrupted HPRO6_63894_G76451.1_148892669
hsa-miR-34a-5p ggCACTGCCcgatat UGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-34c-5p ggCACTGCCcgatat AGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-449a ggCACTGCCcgatat UGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-449b-5p ggCACTGCCcgatat AGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-5188 ggcactGTCCGATat AAUCGGAC m7b Created HPRO6_63894_G76451.1_148892669
hsa-miR-7112-5p ggcaCTGCCCGatat ACGGGCAG m7b Disrupted HPRO6_63894_G76451.1_148892669
hsa-miR-3181 ggcactGCCCGATat AUCGGGCC m7a Disrupted HPRO6_63894_G76451.1_148892669
hsa-miR-34a-5p ggCACTGCCcgatat UGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-34c-5p ggCACTGCCcgatat AGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-449a ggCACTGCCcgatat UGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-449b-5p ggCACTGCCcgatat AGGCAGUG m7b (m7b->m6b) HPRO6_63894_G76451.1_148892669
hsa-miR-5188 ggcactGTCCGATat AAUCGGAC m7b Created HPRO6_63894_G76451.1_148892669
hsa-miR-7112-5p ggcaCTGCCCGatat ACGGGCAG m7b Disrupted HPRO6_63894_G76451.1_148892669

Mutation Mutation ID Sample Name Cancer Type
chr5:g.149513105T>A COSM329284 91827 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][plasma_cell_myeloma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-21-5p cccgATAAGCTAgca UAGCUUAU m8a Created HPRO6_63894_G76451.1_148892669
hsa-miR-5579-3p cccgaTAAGCTAgca UUAGCUUA m7b Created HPRO6_63894_G76451.1_148892669
hsa-miR-590-5p cccgATAAGCTagca GAGCUUAU m7b Created HPRO6_63894_G76451.1_148892669
hsa-miR-621 cccgataTGCTAGCa GGCUAGCA m7b Disrupted HPRO6_63894_G76451.1_148892669
hsa-miR-21-5p cccgATAAGCTAgca UAGCUUAU m8a Created HPRO6_63894_G76451.1_148892669
hsa-miR-5579-3p cccgaTAAGCTAgca UUAGCUUA m7b Created HPRO6_63894_G76451.1_148892669
hsa-miR-590-5p cccgATAAGCTagca GAGCUUAU m7b Created HPRO6_63894_G76451.1_148892669
hsa-miR-621 cccgataTGCTAGCa GGCUAGCA m7b Disrupted HPRO6_63894_G76451.1_148892669

Mutation Mutation ID Sample Name Cancer Type
chr5:g.149509904C>G COSM3827374 TCGA-AO-A03M-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3138 aagaTGTCCACgcct UGUGGACA m7b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-3138 aagaTGTCCACgcct UGUGGACA m7b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-3138 aagaTGTCCACgcct UGUGGACA m7b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-3138 aagaTGTCCACgcct UGUGGACA m7b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237

Mutation Mutation ID Sample Name Cancer Type
chr5:g.149509893G>T COSM95590 87971 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302a-5p gcctGTTTAAGTttt ACUUAAAC m8a Created HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-421 gcCTGTTGAagtttt AUCAACAG m7b (m7b->m6b) HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-4709-5p gcCTGTTGaagtttt ACAACAGU m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-676-5p gcctGTTGAAGtttt UCUUCAAC m7b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-302a-5p gcctGTTTAAGTttt ACUUAAAC m8a Created HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-421 gcCTGTTGAagtttt AUCAACAG m7b (m7b->m6b) HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-4709-5p gcCTGTTGaagtttt ACAACAGU m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-676-5p gcctGTTGAAGtttt UCUUCAAC m7b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237

Mutation Mutation ID Sample Name Cancer Type
chr5:g.149509890G>T COSM737272 TCGA-60-2712-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4272 tGTTGAATttttatg CAUUCAAC m7b Created HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548a-3p tgttgaAGTTTTatg CAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548az-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548c-3p tgttgaATTTTTatg CAAAAAUC m6b Created HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548e-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548f-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-5582-3p tgttgAAGTTTTAtg UAAAACUU m8a Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-676-5p tGTTGAAGttttatg UCUUCAAC m7b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-4272 tGTTGAATttttatg CAUUCAAC m7b Created HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548a-3p tgttgaAGTTTTatg CAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548az-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548c-3p tgttgaATTTTTatg CAAAAAUC m6b Created HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548e-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548f-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-5582-3p tgttgAAGTTTTAtg UAAAACUU m8a Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-676-5p tGTTGAAGttttatg UCUUCAAC m7b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-4272 tGTTGAATttttatg CAUUCAAC m7b Created HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548a-3p tgttgaAGTTTTatg CAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548az-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548c-3p tgttgaATTTTTatg CAAAAAUC m6b Created HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548e-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548f-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-5582-3p tgttgAAGTTTTAtg UAAAACUU m8a Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-676-5p tGTTGAAGttttatg UCUUCAAC m7b Disrupted HHHNA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-4272 tGTTGAATttttatg CAUUCAAC m7b Created HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548a-3p tgttgaAGTTTTatg CAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548az-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548c-3p tgttgaATTTTTatg CAAAAAUC m6b Created HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548e-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-548f-3p tgttgaAGTTTTatg AAAAACUG m6b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-5582-3p tgttgAAGTTTTAtg UAAAACUU m8a Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237
hsa-miR-676-5p tGTTGAAGttttatg UCUUCAAC m7b Disrupted HHHSA_18304_CSNK1A1|NM_001025105|exon_CDS|-6.84987794338359|-1.3621768380237

Mutation Mutation ID Sample Name Cancer Type
chr5:g.149505578A>G COSM1202493 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1279 catCAATATGActac UCAUAUUG m8a Disrupted HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-130a-5p catcAATGTGActac UUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-23a-3p catcAATGTGActac AUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-23b-3p catcAATGTGActac AUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-23c catcAATGTGActac AUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-1279 catCAATATGActac UCAUAUUG m8a Disrupted HPSD3_8390_G11276.1_148885140
hsa-miR-130a-5p catcAATGTGActac UUCACAUU m7b Created HPSD3_8390_G11276.1_148885140
hsa-miR-23a-3p catcAATGTGActac AUCACAUU m7b Created HPSD3_8390_G11276.1_148885140
hsa-miR-23b-3p catcAATGTGActac AUCACAUU m7b Created HPSD3_8390_G11276.1_148885140
hsa-miR-23c catcAATGTGActac AUCACAUU m7b Created HPSD3_8390_G11276.1_148885140
hsa-miR-1279 catCAATATGActac UCAUAUUG m8a Disrupted HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-130a-5p catcAATGTGActac UUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-23a-3p catcAATGTGActac AUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-23b-3p catcAATGTGActac AUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-23c catcAATGTGActac AUCACAUU m7b Created HHRBL_11755_BCBL1-2of3-SCL_12078
hsa-miR-1279 catCAATATGActac UCAUAUUG m8a Disrupted HPSD3_8390_G11276.1_148885140
hsa-miR-130a-5p catcAATGTGActac UUCACAUU m7b Created HPSD3_8390_G11276.1_148885140
hsa-miR-23a-3p catcAATGTGActac AUCACAUU m7b Created HPSD3_8390_G11276.1_148885140
hsa-miR-23b-3p catcAATGTGActac AUCACAUU m7b Created HPSD3_8390_G11276.1_148885140
hsa-miR-23c catcAATGTGActac AUCACAUU m7b Created HPSD3_8390_G11276.1_148885140

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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