SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0083490
Gene Symbol: CSGALNACT1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.19420398T>A COSM360412 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4436b-5p tctgtgAAGTGGACa GUCCACUU m8a Created HHFCT_149746_cluster-22256_18_6
hsa-miR-499a-3p tctGTGATGTggaca AACAUCAC m7b Disrupted HHFCT_149746_cluster-22256_18_6
hsa-miR-499b-3p tctGTGATGTggaca AACAUCAC m7b Disrupted HHFCT_149746_cluster-22256_18_6

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19420392C>T COSM2784993 SNU-C2B [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-576-3p atgtggACATCTact AAGAUGUG m6b Disrupted HHFCT_149746_cluster-22256_18_6
hsa-miR-3935 atgtggaTATCTACt UGUAGAUA m7b Created HHFCT_149746_cluster-22256_18_6
hsa-miR-219b-5p atgtGGACATCTact AGAUGUCC m8a Disrupted HHFCT_149746_cluster-22256_18_6

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19420363C>T COSM1097810 TCGA-D1-A0ZS-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1279 ctCAATATGtgtagg UCAUAUUG m7b (m6b->m7b) HHFCT_149746_cluster-22256_18_6
hsa-miR-4643 ctcaatATGTGTagg GACACAUG m6b Created HHFCT_149746_cluster-22256_18_6
hsa-miR-466 ctcaatATGTGTAgg AUACACAU m7b Created HHFCT_149746_cluster-22256_18_6
hsa-miR-4789-3p ctcaaTATGTGTagg CACACAUA m7b Created HHFCT_149746_cluster-22256_18_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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