SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_027941
Gene Symbol: COX11
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.54968532G>T COSM981546 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3176 tAGGCCAGagtggag ACUGGCCU m7b Disrupted HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-3922-3p tAGGCCAGAgtggag UCUGGCCU m8a (m8a->m7a) HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-514a-5p taggCCAGAGTggag UACUCUGG m7b Disrupted HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-6777-3p taggccAGAGTGGAg UCCACUCU m8a Disrupted HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-3176 tAGGCCAGagtggag ACUGGCCU m7b Disrupted HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-3922-3p tAGGCCAGAgtggag UCUGGCCU m8a (m8a->m7a) HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-514a-5p taggCCAGAGTggag UACUCUGG m7b Disrupted HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-6777-3p taggccAGAGTGGAg UCCACUCU m8a Disrupted HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54968499C>T COSM981545 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1910-5p gagAGGACTGaggtg CCAGUCCU m7b Disrupted HHHNA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-3909 gAGAGGACtgaggtg UGUCCUCU m7b Disrupted HHHNA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-4264 gagagGACTGAGgtg ACUCAGUC m7b Disrupted HHHNA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-455-3p gagaGGACTGaggtg GCAGUCCA m6b Disrupted HHHNA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-1910-5p gagAGGACTGaggtg CCAGUCCU m7b Disrupted HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-3909 gAGAGGACtgaggtg UGUCCUCU m7b Disrupted HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-4264 gagagGACTGAGgtg ACUCAGUC m7b Disrupted HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-455-3p gagaGGACTGaggtg GCAGUCCA m6b Disrupted HHHNA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-1910-5p gagAGGACTGaggtg CCAGUCCU m7b Disrupted HHHSA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-3909 gAGAGGACtgaggtg UGUCCUCU m7b Disrupted HHHSA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-4264 gagagGACTGAGgtg ACUCAGUC m7b Disrupted HHHSA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-455-3p gagaGGACTGaggtg GCAGUCCA m6b Disrupted HHHSA_10103_COX11|NM_001162861|exon_CDS|-4.90840611309274|-1.07224167197393
hsa-miR-1910-5p gagAGGACTGaggtg CCAGUCCU m7b Disrupted HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-3909 gAGAGGACtgaggtg UGUCCUCU m7b Disrupted HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-4264 gagagGACTGAGgtg ACUCAGUC m7b Disrupted HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871
hsa-miR-455-3p gagaGGACTGaggtg GCAGUCCA m6b Disrupted HHHSA_10104_COX11|NM_001162861|exon_CDS|-4.75412189312524|-1.07215099225871

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54964825G>T COSM4768559 XHDG09 [biliary_tract][gallbladder][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4738-3p agCAGTTTCAggtca UGAAACUG m8a Created HPRO6_34983_G41375.1_53042186
hsa-miR-4772-3p agcaGTTGCAGGtca CCUGCAAC m8a Disrupted HPRO6_34983_G41375.1_53042186
hsa-miR-548av-3p aGCAGTTTcaggtca AAAACUGC m7b Created HPRO6_34983_G41375.1_53042186

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54964809A>C COSM4454124 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1231 gcctCAGACAagatt GUGUCUGG m6b Disrupted HHFKP_60505_cluster-10452_9_215
hsa-miR-3655 gcctcaGACAAGatt GCUUGUCG m6b Disrupted HHFKP_60505_cluster-10452_9_215
hsa-miR-4649-3p GCCTCAGAcaagatt UCUGAGGC m8a Disrupted HHFKP_60505_cluster-10452_9_215
hsa-miR-632 gcctCAGACAagatt GUGUCUGC m6b Disrupted HHFKP_60505_cluster-10452_9_215
hsa-miR-647 gcctCAGCCAagatt GUGGCUGC m6b Created HHFKP_60505_cluster-10452_9_215
hsa-miR-7160-5p gCCTCAGCcaagatt UGCUGAGG m7b Created HHFKP_60505_cluster-10452_9_215
hsa-miR-8077 gcCTCAGCCaagatt GGCUGAGU m7a (m6a->m7a) HHFKP_60505_cluster-10452_9_215

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54964738A>C COSM3701244 RK057_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-3p gcatgcaCGTCTCCa UGGAGACG m7b Created HHFCT_63781_cluster-10452_5_22
hsa-miR-4536-3p gcATGCACGtctcca UCGUGCAU m7b (m6b->m7b) HHFCT_63781_cluster-10452_5_22
hsa-miR-6863 gcatgCACGTCTcca UAGACGUG m7b Created HHFCT_63781_cluster-10452_5_22
hsa-miR-873-3p gcatgcaAGTCTCCa GGAGACUG m7a Disrupted HHFCT_63781_cluster-10452_5_22

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54963376A>T COSM3742330 RK214_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-1-5p actgacAAACCAGta GCUGGUUU m7b Disrupted HHFKP_60504_cluster-10452_8_26
hsa-miR-4774-5p actgacATACCAGta UCUGGUAU m7b Created HHFKP_60504_cluster-10452_8_26
hsa-miR-5087 actgACAAACCagta GGGUUUGU m7b Disrupted HHFKP_60504_cluster-10452_8_26
hsa-miR-29b-1-5p actgacAAACCAGta GCUGGUUU m7b Disrupted HPCB1_18030_G22623.1_53040740
hsa-miR-4774-5p actgacATACCAGta UCUGGUAU m7b Created HPCB1_18030_G22623.1_53040740
hsa-miR-5087 actgACAAACCagta GGGUUUGU m7b Disrupted HPCB1_18030_G22623.1_53040740

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54963335G>C COSM706793 TCGA-39-5031-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p tcCATTTGAagctgg UCAAAUGC m7a (m7a->m6a) HPRO6_34981_G41373.1_53040706
hsa-miR-203a-3p tcCATTTCAagctgg GUGAAAUG m7b (m6b->m7b) HPRO6_34981_G41373.1_53040706
hsa-miR-3671 tccATTTGAagctgg AUCAAAUA m6b Disrupted HPRO6_34981_G41373.1_53040706
hsa-miR-4694-3p TCCATTTGaagctgg CAAAUGGA m8a Disrupted HPRO6_34981_G41373.1_53040706
hsa-miR-607 tccATTTGAAgctgg GUUCAAAU m7b Disrupted HPRO6_34981_G41373.1_53040706
hsa-miR-7853-5p tcCATTTGAagctgg UCAAAUGC m7a (m7a->m6a) HPRO6_34981_G41373.1_53040706

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54962792T>C COSM473065 TCGA-BP-5187-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6077 caCTCTTCCttacac GGGAAGAG m7b (m6b->m7b) HPKTA_27841_G29902.1_53040150
hsa-miR-651-3p cactcTTCCTTacac AAAGGAAA m6b Created HPKTA_27841_G29902.1_53040150
hsa-miR-6077 caCTCTTCCttacac GGGAAGAG m7b (m6b->m7b) HPRO6_34979_G41371.1_53040149
hsa-miR-651-3p cactcTTCCTTacac AAAGGAAA m6b Created HPRO6_34979_G41371.1_53040149
hsa-miR-6077 caCTCTTCCttacac GGGAAGAG m7b (m6b->m7b) HPSEF_10267_G12307.1_53040167
hsa-miR-651-3p cactcTTCCTTacac AAAGGAAA m6b Created HPSEF_10267_G12307.1_53040167

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54962777G>TG COSM4674248 T3024 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3977 ttttttTGAAGCAaa GUGCUUCA m7b Disrupted HPKTA_27841_G29902.1_53040150
hsa-miR-3977 ttttttTGAAGCAaa GUGCUUCA m7b Disrupted HPRO6_34979_G41371.1_53040149

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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