SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0037825
Gene Symbol: CLEC16A
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.10962543A>T COSM1518209 TCGA-95-7039-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4761-5p gctgcagACCTTGaa ACAAGGUG m6b Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-4527 gctGCAGACCttgaa UGGUCUGC m7b Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-4418 gCTGCAGTccttgaa CACUGCAG m7b Created HHFCT_58071_cluster-8402_1_16
hsa-miR-3169 gctgCAGTCCTtgaa UAGGACUG m7b Created HHFCT_58071_cluster-8402_1_16
hsa-miR-1288-3p gctGCAGTCCttgaa UGGACUGC m7b Created HHFCT_58071_cluster-8402_1_16
hsa-miR-6830-5p gctgcagTCCTTGaa CCAAGGAA m6b Created HHFCT_58071_cluster-8402_1_16
hsa-miR-6503-5p gctGCAGACCTtgaa AGGUCUGC m8a Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-561-5p gctgcagTCCTTGAa AUCAAGGA m7b Created HHFCT_58071_cluster-8402_1_16
hsa-miR-509-5p gCTGCAGTccttgaa UACUGCAG m7b Created HHFCT_58071_cluster-8402_1_16
hsa-miR-509-3-5p gCTGCAGTccttgaa UACUGCAG m7b Created HHFCT_58071_cluster-8402_1_16

Mutation Mutation ID Sample Name Cancer Type
chr16:g.10962542G>A COSM294007 TCGA-AA-3819-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5047 tGCTGCAAaccttga UUGCAGCU m7a Created HHFCT_58071_cluster-8402_1_16
hsa-miR-6503-5p tgctGCAGACCTtga AGGUCUGC m8a Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-7156-3p tGCTGCAGaccttga CUGCAGCC m7a Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-4748 tgctgCAAACCTtga GAGGUUUG m7b Created HHFCT_58071_cluster-8402_1_16
hsa-miR-4527 tgctGCAGACCttga UGGUCUGC m7b Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-4464 tgctgCAAACCTTga AAGGUUUG m8a Created HHFCT_58071_cluster-8402_1_16

Mutation Mutation ID Sample Name Cancer Type
chr16:g.10962521C>T COSM148020 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4789-3p gccgtTATGTGTGcg CACACAUA m8a Created HHFCT_58071_cluster-8402_1_16

Mutation Mutation ID Sample Name Cancer Type
chr16:g.10962517G>A COSM122186 HN_62298 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-337-5p tcggGCCGTTacgtg GAACGGCU m6b Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-4485-3p tcgGGCCGTTAcgtg UAACGGCC m8a Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-5197-5p tcggGCCATTacgtg CAAUGGCA m6b Created HHFCT_58071_cluster-8402_1_16

Mutation Mutation ID Sample Name Cancer Type
chr16:g.10962515C>T COSM702003 TCGA-66-2783-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4485-3p agtcgGGCCGTTAcg UAACGGCC m8a Disrupted HHFCT_58071_cluster-8402_1_16
hsa-miR-337-5p agtcggGCCGTTacg GAACGGCU m6b Disrupted HHFCT_58071_cluster-8402_1_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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