SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0066594
Gene Symbol: CHMP2B
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.87245792C>T COSM335197 LUAD-B02077 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-587 gcatcTATGGAAAca UUUCCAUA m8a Created HPCB1_26761_G34073.1_87294930
hsa-miR-587 gcatcTATGGAAAca UUUCCAUA m8a Created HPKTA_41759_G44932.1_87294929
hsa-miR-587 gcatcTATGGAAAca UUUCCAUA m8a Created HPRO6_53525_G63543.1_87294929

Mutation Mutation ID Sample Name Cancer Type
chr3:g.87245781T>G COSM1425577 TCGA-G4-6586-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125b-2-3p aaacaACTTGTGcat UCACAAGU m7b Disrupted HPCB1_26761_G34073.1_87294930
hsa-miR-382-5p aaACAACTTgtgcat GAAGUUGU m7b (m7b->m6b) HPCB1_26761_G34073.1_87294930
hsa-miR-8064 aaacaacGTGTGCat AGCACACU m6b Created HPCB1_26761_G34073.1_87294930
hsa-miR-125b-2-3p aaacaACTTGTGcat UCACAAGU m7b Disrupted HPKTA_41759_G44932.1_87294929
hsa-miR-382-5p aaACAACTTgtgcat GAAGUUGU m7b (m7b->m6b) HPKTA_41759_G44932.1_87294929
hsa-miR-8064 aaacaacGTGTGCat AGCACACU m6b Created HPKTA_41759_G44932.1_87294929
hsa-miR-125b-2-3p aaacaACTTGTGcat UCACAAGU m7b Disrupted HPRO6_53525_G63543.1_87294929
hsa-miR-382-5p aaACAACTTgtgcat GAAGUUGU m7b (m7b->m6b) HPRO6_53525_G63543.1_87294929
hsa-miR-8064 aaacaacGTGTGCat AGCACACU m6b Created HPRO6_53525_G63543.1_87294929
hsa-miR-125b-2-3p aaacaACTTGTGcat UCACAAGU m7b Disrupted HPTK1_20364_G24231.1_87294930
hsa-miR-382-5p aaACAACTTgtgcat GAAGUUGU m7b (m7b->m6b) HPTK1_20364_G24231.1_87294930
hsa-miR-8064 aaacaacGTGTGCat AGCACACU m6b Created HPTK1_20364_G24231.1_87294930

Mutation Mutation ID Sample Name Cancer Type
chr3:g.87245779A>G COSM82067 TCGA-13-0720-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125b-2-3p ccaaacaACTTGTGc UCACAAGU m7b Disrupted HPCB1_26761_G34073.1_87294930
hsa-miR-382-5p ccaaACAACTTgtgc GAAGUUGU m7b Disrupted HPCB1_26761_G34073.1_87294930
hsa-miR-125b-2-3p ccaaacaACTTGTGc UCACAAGU m7b Disrupted HPKTA_41759_G44932.1_87294929
hsa-miR-382-5p ccaaACAACTTgtgc GAAGUUGU m7b Disrupted HPKTA_41759_G44932.1_87294929
hsa-miR-125b-2-3p ccaaacaACTTGTGc UCACAAGU m7b Disrupted HPRO6_53525_G63543.1_87294929
hsa-miR-382-5p ccaaACAACTTgtgc GAAGUUGU m7b Disrupted HPRO6_53525_G63543.1_87294929
hsa-miR-125b-2-3p ccaaacaACTTGTGc UCACAAGU m7b Disrupted HPTK1_20364_G24231.1_87294930
hsa-miR-382-5p ccaaACAACTTgtgc GAAGUUGU m7b Disrupted HPTK1_20364_G24231.1_87294930

Mutation Mutation ID Sample Name Cancer Type
chr3:g.87245778A>G COSM1425576 TCGA-CM-5861-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p gccaaACAACTTgtg GAAGUUGU m7b Disrupted HPCB1_26761_G34073.1_87294930
hsa-miR-5707 gcCAAACGacttgtg ACGUUUGA m6b Created HPCB1_26761_G34073.1_87294930
hsa-miR-6882-5p gccaaacGACTTGTg UACAAGUC m7b Created HPCB1_26761_G34073.1_87294930
hsa-miR-382-5p gccaaACAACTTgtg GAAGUUGU m7b Disrupted HPKTA_41759_G44932.1_87294929
hsa-miR-5707 gcCAAACGacttgtg ACGUUUGA m6b Created HPKTA_41759_G44932.1_87294929
hsa-miR-6882-5p gccaaacGACTTGTg UACAAGUC m7b Created HPKTA_41759_G44932.1_87294929
hsa-miR-382-5p gccaaACAACTTgtg GAAGUUGU m7b Disrupted HPRO6_53525_G63543.1_87294929
hsa-miR-5707 gcCAAACGacttgtg ACGUUUGA m6b Created HPRO6_53525_G63543.1_87294929
hsa-miR-6882-5p gccaaacGACTTGTg UACAAGUC m7b Created HPRO6_53525_G63543.1_87294929
hsa-miR-382-5p gccaaACAACTTgtg GAAGUUGU m7b Disrupted HPTK1_20364_G24231.1_87294930
hsa-miR-5707 gcCAAACGacttgtg ACGUUUGA m6b Created HPTK1_20364_G24231.1_87294930
hsa-miR-6882-5p gccaaacGACTTGTg UACAAGUC m7b Created HPTK1_20364_G24231.1_87294930

Mutation Mutation ID Sample Name Cancer Type
chr3:g.87245777C>T COSM1425575 TCGA-ER-A19D-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p agccaaACAACTTgt GAAGUUGU m7b Disrupted HPCB1_26761_G34073.1_87294930
hsa-miR-5002-5p agCCAAATaacttgt AAUUUGGU m6b Created HPCB1_26761_G34073.1_87294930
hsa-miR-6740-5p agCCAAACaacttgt AGUUUGGG m6b Disrupted HPCB1_26761_G34073.1_87294930
hsa-miR-382-5p agccaaACAACTTgt GAAGUUGU m7b Disrupted HPKTA_41759_G44932.1_87294929
hsa-miR-5002-5p agCCAAATaacttgt AAUUUGGU m6b Created HPKTA_41759_G44932.1_87294929
hsa-miR-6740-5p agCCAAACaacttgt AGUUUGGG m6b Disrupted HPKTA_41759_G44932.1_87294929
hsa-miR-382-5p agccaaACAACTTgt GAAGUUGU m7b Disrupted HPRO6_53525_G63543.1_87294929
hsa-miR-5002-5p agCCAAATaacttgt AAUUUGGU m6b Created HPRO6_53525_G63543.1_87294929
hsa-miR-6740-5p agCCAAACaacttgt AGUUUGGG m6b Disrupted HPRO6_53525_G63543.1_87294929
hsa-miR-382-5p agccaaACAACTTgt GAAGUUGU m7b Disrupted HPTK1_20364_G24231.1_87294930
hsa-miR-5002-5p agCCAAATaacttgt AAUUUGGU m6b Created HPTK1_20364_G24231.1_87294930
hsa-miR-6740-5p agCCAAACaacttgt AGUUUGGG m6b Disrupted HPTK1_20364_G24231.1_87294930

Mutation Mutation ID Sample Name Cancer Type
chr3:g.87240736A>G COSM2828048 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4520-5p gaggtACGCAGaggg CCUGCGUG m6b Created HHFKP_103056_uc003dqp.2_5_293

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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