| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_006614 |
|---|---|
| Gene Symbol: | CHL1 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr3:g.394751G>A | COSM3594185 | TCGA-GN-A26C-01 | [skin][NS][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-378g | catcaaAGCCCAGct | ACUGGGCU | m7b | Disrupted | HPSLC_12694_G15021.1_436411 |
| hsa-miR-27a-5p | catcaAAGCCCagct | AGGGCUUA | m6b | Disrupted | HPSLC_12694_G15021.1_436411 |
| hsa-miR-2052 | caTCAAAACccagct | UGUUUUGA | m7b | (m6b->m7b) | HPSLC_12694_G15021.1_436411 |
| hsa-miR-6839-3p | catcaAAACCCAgct | UUGGGUUU | m7b | Created | HPSLC_12694_G15021.1_436411 |
| hsa-miR-5589-5p | catcaaaACCCAGCt | GGCUGGGU | m7b | Created | HPSLC_12694_G15021.1_436411 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr3:g.394740A>C | COSM279889 | TCGA-AA-A010-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3689d | cattaCACCTCCatc | GGGAGGUG | m7b | Created | HPSLC_12694_G15021.1_436411 |
| hsa-miR-6851-5p | cattaCACCTCCatc | AGGAGGUG | m7b | Created | HPSLC_12694_G15021.1_436411 |
| hsa-miR-4802-5p | cattacaCCTCCATc | UAUGGAGG | m7b | Created | HPSLC_12694_G15021.1_436411 |
| hsa-miR-6514-5p | cattacaACTCCATc | UAUGGAGU | m7b | Disrupted | HPSLC_12694_G15021.1_436411 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr3:g.328289ACC>ATT | COSM4517346 | CSCC-29-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-195-3p | gggaAATATTGctgctt | CCAAUAUU | m7b | Created | HHFCT_108516_cluster-15733_1_6 |
| hsa-miR-3942-5p | gggaaaTATTGCTgctt | AAGCAAUA | m7b | Created | HHFCT_108516_cluster-15733_1_6 |
| hsa-miR-4703-5p | gggaaaTATTGCTgctt | UAGCAAUA | m7b | Created | HHFCT_108516_cluster-15733_1_6 |
| hsa-miR-16-2-3p | gggaAATATTGctgctt | CCAAUAUU | m7b | Created | HHFCT_108516_cluster-15733_1_6 |