SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0039368
Gene Symbol: CHD9
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr16:g.53267414C>T COSM971425 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3925-3p caaactCTGGAGacc ACUCCAGU m6b Created HHFKP_56302_cluster-8603_15_319
hsa-miR-520a-5p caaaCTCTGGAGacc CUCCAGAG m8a Created HHFKP_56302_cluster-8603_15_319
hsa-miR-525-5p caaaCTCTGGAGacc CUCCAGAG m8a Created HHFKP_56302_cluster-8603_15_319
hsa-miR-766-3p caaactCTGGAGacc ACUCCAGC m6b Created HHFKP_56302_cluster-8603_15_319
hsa-miR-1203 caaaCTCCGGagacc CCCGGAGC m6b Disrupted HHFKP_56302_cluster-8603_15_319

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53263011C>T COSM3818088 TCGA-AN-A0AK-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-5p tggaAACTGGACaga GUCCAGUU m8a Created HHFKP_56301_cluster-8603_14_52
hsa-miR-198 tggaaaCTGGACaga GGUCCAGA m6b Created HHFKP_56301_cluster-8603_14_52
hsa-miR-4328 tggAAACTGGacaga CCAGUUUU m7a Created HHFKP_56301_cluster-8603_14_52
hsa-miR-5195-3p tggaAACTGGAcaga AUCCAGUU m7b Created HHFKP_56301_cluster-8603_14_52

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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