SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0039367
Gene Symbol: CHD9
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53274256G>A COSM1248232 ESO-118 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.53274253G>T COSM191131 TCGA-AA-3984-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-137 aaAGCAATAAgttat UUAUUGCU m8a Created HHRBC_4958_BC3-2of3-SCL_6284
hsa-miR-137 aaAGCAATAAgttat UUAUUGCU m8a Created HHRBL_5707_BCBL1-2of3-SCL_7011

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53274228G>A COSM435384 TCGA-B6-A0RG-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1229-3p ttcgtGTGAGAatgc CUCUCACC m6b Disrupted HHRBC_4958_BC3-2of3-SCL_6284
hsa-miR-342-3p ttcGTGTGAGAatgc UCUCACAC m8a Disrupted HHRBC_4958_BC3-2of3-SCL_6284
hsa-miR-600 ttcgTGTAAGaatgc ACUUACAG m6b Created HHRBC_4958_BC3-2of3-SCL_6284
hsa-miR-1229-3p ttcgtGTGAGAatgc CUCUCACC m6b Disrupted HHRBL_5707_BCBL1-2of3-SCL_7011
hsa-miR-342-3p ttcGTGTGAGAatgc UCUCACAC m8a Disrupted HHRBL_5707_BCBL1-2of3-SCL_7011
hsa-miR-600 ttcgTGTAAGaatgc ACUUACAG m6b Created HHRBL_5707_BCBL1-2of3-SCL_7011

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53255640G>T COSM1519434 TCGA-50-5930-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-877-3p ctgcttcGAAGAGGt UCCUCUUC m7b Disrupted HHHNA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-877-3p ctgcttcGAAGAGGt UCCUCUUC m7b Disrupted HHHSA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53255640G>A COSM971423 587222 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p ctGCTTCAaagaggt CUGAAGCU m6b Created HHHNA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-7843-3p ctGCTTCAaagaggt AUGAAGCC m6b Created HHHNA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-877-3p ctgcttcGAAGAGGt UCCUCUUC m7b Disrupted HHHNA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-127-5p ctGCTTCAaagaggt CUGAAGCU m6b Created HHHSA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-7843-3p ctGCTTCAaagaggt AUGAAGCC m6b Created HHHSA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-877-3p ctgcttcGAAGAGGt UCCUCUUC m7b Disrupted HHHSA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53255639C>T COSM971422 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-330-3p tcTGCTTTGaagagg GCAAAGCA m7b (m6b->m7b) HHHNA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-6515-3p tctgcttTGAAGAGg UCUCUUCA m7b Created HHHNA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-330-3p tcTGCTTTGaagagg GCAAAGCA m7b (m6b->m7b) HHHSA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-6515-3p tctgcttTGAAGAGg UCUCUUCA m7b Created HHHSA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53255635G>A COSM3679915 SNUH_G46_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7161-3p AAGATCTActtcgaa UAGAUCUU m8a Created HHHNA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979
hsa-miR-7161-3p AAGATCTActtcgaa UAGAUCUU m8a Created HHHSA_8724_CHD9|NM_025134|exon_CDS|-7.81212775060755|0.720783181657979

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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