SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0039354
Gene Symbol: CHD9
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238408A>G COSM290360 TCGA-AG-A025-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-3p ttcctCTGTGAAatc UUCACAGU m7a Created HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-27b-3p ttcctCTGTGAAatc UUCACAGU m7a Created HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-3125 TTCCTCTAtgaaatc UAGAGGAA m8a Disrupted HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-376a-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-376b-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-513a-5p ttcctCTGTGAAatc UUCACAGG m7a Created HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-6847-5p tTCCTCTGTgaaatc ACAGAGGA m8a (m7a->m8a) HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-27a-3p ttcctCTGTGAAatc UUCACAGU m7a Created HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-27b-3p ttcctCTGTGAAatc UUCACAGU m7a Created HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-3125 TTCCTCTAtgaaatc UAGAGGAA m8a Disrupted HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-376a-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-376b-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-513a-5p ttcctCTGTGAAatc UUCACAGG m7a Created HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-6847-5p tTCCTCTGTgaaatc ACAGAGGA m8a (m7a->m8a) HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-27a-3p ttcctCTGTGAAatc UUCACAGU m7a Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-27b-3p ttcctCTGTGAAatc UUCACAGU m7a Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-3125 TTCCTCTAtgaaatc UAGAGGAA m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-376a-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-376b-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-513a-5p ttcctCTGTGAAatc UUCACAGG m7a Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-6847-5p tTCCTCTGTgaaatc ACAGAGGA m8a (m7a->m8a) HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-27a-3p ttcctCTGTGAAatc UUCACAGU m7a Created HPCB3_8435_G11610.1_53272320
hsa-miR-27b-3p ttcctCTGTGAAatc UUCACAGU m7a Created HPCB3_8435_G11610.1_53272320
hsa-miR-3125 TTCCTCTAtgaaatc UAGAGGAA m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-376a-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-376b-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-513a-5p ttcctCTGTGAAatc UUCACAGG m7a Created HPCB3_8435_G11610.1_53272320
hsa-miR-6847-5p tTCCTCTGTgaaatc ACAGAGGA m8a (m7a->m8a) HPCB3_8435_G11610.1_53272320
hsa-miR-27a-3p ttcctCTGTGAAatc UUCACAGU m7a Created HPSEF_8774_G10521.1_53272308
hsa-miR-27b-3p ttcctCTGTGAAatc UUCACAGU m7a Created HPSEF_8774_G10521.1_53272308
hsa-miR-3125 TTCCTCTAtgaaatc UAGAGGAA m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-376a-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-376b-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-513a-5p ttcctCTGTGAAatc UUCACAGG m7a Created HPSEF_8774_G10521.1_53272308
hsa-miR-6847-5p tTCCTCTGTgaaatc ACAGAGGA m8a (m7a->m8a) HPSEF_8774_G10521.1_53272308
hsa-miR-27a-3p ttcctCTGTGAAatc UUCACAGU m7a Created HPSLC_7542_G8917.1_53272312
hsa-miR-27b-3p ttcctCTGTGAAatc UUCACAGU m7a Created HPSLC_7542_G8917.1_53272312
hsa-miR-3125 TTCCTCTAtgaaatc UAGAGGAA m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-376a-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-376b-3p ttccTCTATGAaatc AUCAUAGA m7b Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-513a-5p ttcctCTGTGAAatc UUCACAGG m7a Created HPSLC_7542_G8917.1_53272312
hsa-miR-6847-5p tTCCTCTGTgaaatc ACAGAGGA m8a (m7a->m8a) HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238395A>G COSM416978 TCGA-05-5423-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-379-3p tcaatcaGTTACATt UAUGUAAC m7b Created HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-380-3p tcaatcaATTACATt UAUGUAAU m7b Disrupted HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-411-3p tcaatcaGTTACATt UAUGUAAC m7b Created HHHNE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-379-3p tcaatcaGTTACATt UAUGUAAC m7b Created HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-380-3p tcaatcaATTACATt UAUGUAAU m7b Disrupted HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-411-3p tcaatcaGTTACATt UAUGUAAC m7b Created HHHSE_3732_CHD9|NM_025134|exon_CDS|-7.63192809884418|1.18458684986788
hsa-miR-379-3p tcaatcaGTTACATt UAUGUAAC m7b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-380-3p tcaatcaATTACATt UAUGUAAU m7b Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-411-3p tcaatcaGTTACATt UAUGUAAC m7b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-379-3p tcaatcaGTTACATt UAUGUAAC m7b Created HPCB3_8435_G11610.1_53272320
hsa-miR-380-3p tcaatcaATTACATt UAUGUAAU m7b Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-411-3p tcaatcaGTTACATt UAUGUAAC m7b Created HPCB3_8435_G11610.1_53272320
hsa-miR-379-3p tcaatcaGTTACATt UAUGUAAC m7b Created HPSEF_8774_G10521.1_53272308
hsa-miR-380-3p tcaatcaATTACATt UAUGUAAU m7b Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-411-3p tcaatcaGTTACATt UAUGUAAC m7b Created HPSEF_8774_G10521.1_53272308
hsa-miR-379-3p tcaatcaGTTACATt UAUGUAAC m7b Created HPSLC_7542_G8917.1_53272312
hsa-miR-380-3p tcaatcaATTACATt UAUGUAAU m7b Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-411-3p tcaatcaGTTACATt UAUGUAAC m7b Created HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238390A>G COSM1563078 TCGA-DY-A1DG-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-5p actatTCGATCaatt AGAUCGAC m6b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-5585-3p aCTATTCAatcaatt CUGAAUAG m7b Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-369-5p actatTCGATCaatt AGAUCGAC m6b Created HPCB3_8435_G11610.1_53272320
hsa-miR-5585-3p aCTATTCAatcaatt CUGAAUAG m7b Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-369-5p actatTCGATCaatt AGAUCGAC m6b Created HPSEF_8774_G10521.1_53272308
hsa-miR-5585-3p aCTATTCAatcaatt CUGAAUAG m7b Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-369-5p actatTCGATCaatt AGAUCGAC m6b Created HPSLC_7542_G8917.1_53272312
hsa-miR-5585-3p aCTATTCAatcaatt CUGAAUAG m7b Disrupted HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238389C>T COSM1378315 TCGA-CK-4950-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3121-3p aaCTATTTAatcaat UAAAUAGA m7a (m6a->m7a) HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-3121-3p aaCTATTTAatcaat UAAAUAGA m7a (m6a->m7a) HPCB3_8435_G11610.1_53272320
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HPCB3_8435_G11610.1_53272320
hsa-miR-3121-3p aaCTATTTAatcaat UAAAUAGA m7a (m6a->m7a) HPSEF_8774_G10521.1_53272308
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HPSEF_8774_G10521.1_53272308
hsa-miR-3121-3p aaCTATTTAatcaat UAAAUAGA m7a (m6a->m7a) HPSLC_7542_G8917.1_53272312
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238389C>G COSM25184 NCI-H2009 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-6826-5p aaCTATTGAatcaat UCAAUAGG m7a (m6a->m7a) HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HPCB3_8435_G11610.1_53272320
hsa-miR-6826-5p aaCTATTGAatcaat UCAAUAGG m7a (m6a->m7a) HPCB3_8435_G11610.1_53272320
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HPSEF_8774_G10521.1_53272308
hsa-miR-6826-5p aaCTATTGAatcaat UCAAUAGG m7a (m6a->m7a) HPSEF_8774_G10521.1_53272308
hsa-miR-5585-3p aaCTATTCAatcaat CUGAAUAG m7b (m7b->m6b) HPSLC_7542_G8917.1_53272312
hsa-miR-6826-5p aaCTATTGAatcaat UCAAUAGG m7a (m6a->m7a) HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238386A>G COSM4061196 TCGA-BR-4191-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4328 cAAAACTGttcaatc CCAGUUUU m7b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-5585-3p caaaaCTATTCAatc CUGAAUAG m7b Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-4328 cAAAACTGttcaatc CCAGUUUU m7b Created HPCB3_8435_G11610.1_53272320
hsa-miR-5585-3p caaaaCTATTCAatc CUGAAUAG m7b Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-4328 cAAAACTGttcaatc CCAGUUUU m7b Created HPSEF_8774_G10521.1_53272308
hsa-miR-5585-3p caaaaCTATTCAatc CUGAAUAG m7b Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-4328 cAAAACTGttcaatc CCAGUUUU m7b Created HPSLC_7542_G8917.1_53272312
hsa-miR-5585-3p caaaaCTATTCAatc CUGAAUAG m7b Disrupted HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238385T>C COSM1563079 TCGA-AF-2693-01 [large_intestine][rectum][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-4790-3p gcaaaACCATTCAat UGAAUGGU m8a Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-4790-3p gcaaaACCATTCAat UGAAUGGU m8a Created HPCB3_8435_G11610.1_53272320
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-4790-3p gcaaaACCATTCAat UGAAUGGU m8a Created HPSEF_8774_G10521.1_53272308
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-4790-3p gcaaaACCATTCAat UGAAUGGU m8a Created HPSLC_7542_G8917.1_53272312
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238385T>A COSM25183 BB65-RCC [kidney][NS][carcinoma][renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-183-3p gcaaaacAATTCAat GUGAAUUA m6b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-219a-2-3p gcaaaACAATTCaat AGAAUUGU m7b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-219b-3p gcaaaaCAATTCaat AGAAUUGC m6b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-183-3p gcaaaacAATTCAat GUGAAUUA m6b Created HPCB3_8435_G11610.1_53272320
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-219a-2-3p gcaaaACAATTCaat AGAAUUGU m7b Created HPCB3_8435_G11610.1_53272320
hsa-miR-219b-3p gcaaaaCAATTCaat AGAAUUGC m6b Created HPCB3_8435_G11610.1_53272320
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-183-3p gcaaaacAATTCAat GUGAAUUA m6b Created HPSEF_8774_G10521.1_53272308
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-219a-2-3p gcaaaACAATTCaat AGAAUUGU m7b Created HPSEF_8774_G10521.1_53272308
hsa-miR-219b-3p gcaaaaCAATTCaat AGAAUUGC m6b Created HPSEF_8774_G10521.1_53272308
hsa-miR-5585-3p gcaaaaCTATTCAat CUGAAUAG m7b Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-183-3p gcaaaacAATTCAat GUGAAUUA m6b Created HPSLC_7542_G8917.1_53272312
hsa-miR-19a-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-19b-1-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-19b-2-5p GCAAAACTattcaat AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-219a-2-3p gcaaaACAATTCaat AGAAUUGU m7b Created HPSLC_7542_G8917.1_53272312
hsa-miR-219b-3p gcaaaaCAATTCaat AGAAUUGC m6b Created HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53238383A>G COSM1378314 TCGA-DM-A1D7-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-3p tgGCAAAGCtattca CGCUUUGC m7b (m6b->m7b) HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19a-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19b-1-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-19b-2-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-208a-5p tggcAAAGCTattca GAGCUUUU m6b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-208b-5p tggcAAAGCTattca AAGCUUUU m6b Created HHKTA_35105_NM_025134|2879|2918|2.1201291115361|0.127600863062919
hsa-miR-1251-3p tgGCAAAGCtattca CGCUUUGC m7b (m6b->m7b) HPCB3_8435_G11610.1_53272320
hsa-miR-19a-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-19b-1-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-19b-2-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPCB3_8435_G11610.1_53272320
hsa-miR-208a-5p tggcAAAGCTattca GAGCUUUU m6b Created HPCB3_8435_G11610.1_53272320
hsa-miR-208b-5p tggcAAAGCTattca AAGCUUUU m6b Created HPCB3_8435_G11610.1_53272320
hsa-miR-1251-3p tgGCAAAGCtattca CGCUUUGC m7b (m6b->m7b) HPSEF_8774_G10521.1_53272308
hsa-miR-19a-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-19b-1-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-19b-2-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPSEF_8774_G10521.1_53272308
hsa-miR-208a-5p tggcAAAGCTattca GAGCUUUU m6b Created HPSEF_8774_G10521.1_53272308
hsa-miR-208b-5p tggcAAAGCTattca AAGCUUUU m6b Created HPSEF_8774_G10521.1_53272308
hsa-miR-1251-3p tgGCAAAGCtattca CGCUUUGC m7b (m6b->m7b) HPSLC_7542_G8917.1_53272312
hsa-miR-19a-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-19b-1-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-19b-2-5p tgGCAAAACTattca AGUUUUGC m8a Disrupted HPSLC_7542_G8917.1_53272312
hsa-miR-208a-5p tggcAAAGCTattca GAGCUUUU m6b Created HPSLC_7542_G8917.1_53272312
hsa-miR-208b-5p tggcAAAGCTattca AAGCUUUU m6b Created HPSLC_7542_G8917.1_53272312

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53235243G>A COSM1378313 TCGA-AD-6889-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-5p aaaaatGACAATCAa UGAUUGUC m8a Created HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-4445-5p aaaaatgACAATCaa AGAUUGUU m6b Created HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-4659a-5p aaaaATGGCAatcaa CUGCCAUG m6b Disrupted HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-4776-3p aaaaATGGCAAtcaa CUUGCCAU m7b Disrupted HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-4782-3p aaaaatGACAATCAa UGAUUGUC m8a Created HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-508-3p aaaaatgACAATCAa UGAUUGUA m7a Created HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-616-3p aaaAATGACaatcaa AGUCAUUG m6b Created HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-6766-3p aaaaatGACAATCAa UGAUUGUC m8a Created HHKTA_9672_NM_025134|2752|2791|6.79306674512586|0.127600863062919
hsa-miR-153-5p AAAAATGAcaatcaa UCAUUUUU m8a Created HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-219a-5p aaaaatGACAATCAa UGAUUGUC m8a Created HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-4445-5p aaaaatgACAATCaa AGAUUGUU m6b Created HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-4659a-5p aaaaATGGCAatcaa CUGCCAUG m6b Disrupted HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-4776-3p aaaaATGGCAAtcaa CUUGCCAU m7b Disrupted HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-4782-3p aaaaatGACAATCAa UGAUUGUC m8a Created HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-508-3p aaaaatgACAATCAa UGAUUGUA m7a Created HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-616-3p aaaAATGACaatcaa AGUCAUUG m6b Created HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919
hsa-miR-6766-3p aaaaatGACAATCAa UGAUUGUC m8a Created HHKTB_1423_NM_025134|2752|2791|52.8339728661291|0.127600863062919

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53209734A>T COSM4061195 TCGA-BR-6852-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1248 aggtAGAAGGatgaa ACCUUCUU m6b Disrupted HHHNE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-4793-5p aggtagaAGGATGaa ACAUCCUG m6b Disrupted HHHNE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-5196-3p aggtagaAGGATGAa UCAUCCUC m7a Disrupted HHHNE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-6868-3p aggtAGAAGGAtgaa UUCCUUCU m7b Disrupted HHHNE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-7151-5p aggtaGATGGATgaa GAUCCAUC m7b Created HHHNE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-1248 aggtAGAAGGatgaa ACCUUCUU m6b Disrupted HHHSE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-4793-5p aggtagaAGGATGaa ACAUCCUG m6b Disrupted HHHSE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-5196-3p aggtagaAGGATGAa UCAUCCUC m7a Disrupted HHHSE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-6868-3p aggtAGAAGGAtgaa UUCCUUCU m7b Disrupted HHHSE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-7151-5p aggtaGATGGATgaa GAUCCAUC m7b Created HHHSE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53209723A>C COSM1629919 RK019_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-627-3p gagGAAAAGAaaggt UCUUUUCU m7a Disrupted HHHNE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847
hsa-miR-627-3p gagGAAAAGAaaggt UCUUUUCU m7a Disrupted HHHSE_3729_CHD9|NM_025134|exon_CDS|-7.22197012832174|-0.662646657504847

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53209657G>A COSM4672107 T263 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-5p gggGAACACaatatt CGUGUUCA m6b Created HHKTA_51317_NM_025134|1830|1869|1.29803823155271|0.127600863062919

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53209653G>T COSM971414 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p gcgTGGGGAacgcaa AUCCCCAG m6b Disrupted HHKTA_51317_NM_025134|1830|1869|1.29803823155271|0.127600863062919
hsa-miR-4286 gcGTGGGGaacgcaa ACCCCACU m6b Disrupted HHKTA_51317_NM_025134|1830|1869|1.29803823155271|0.127600863062919
hsa-miR-5591-3p gcgTGGGTAacgcaa AUACCCAU m6b Created HHKTA_51317_NM_025134|1830|1869|1.29803823155271|0.127600863062919

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53157204G>A COSM1201022 587336 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-3p caaatggACCATTTc AAAAUGGU m7b Created HHKTA_37673_NM_025134|1296|1335|1.99032528838083|0.127600863062919
hsa-miR-522-3p caaatggACCATTTc AAAAUGGU m7b Created HHKTA_37673_NM_025134|1296|1335|1.99032528838083|0.127600863062919

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53157169C>A COSM971410 TCGA-BS-A0UT-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4747-5p acatgaaCTTCCCag AGGGAAGG m6b Disrupted HHHNE_3728_CHD9|NM_025134|exon_CDS|-7.68975469099081|-1.25291726027916
hsa-miR-5196-5p acatgaaCTTCCCag AGGGAAGG m6b Disrupted HHHNE_3728_CHD9|NM_025134|exon_CDS|-7.68975469099081|-1.25291726027916
hsa-miR-1206 aCATGAACttcccag UGUUCAUG m7b Disrupted HHHSE_3728_CHD9|NM_025134|exon_CDS|-7.68975469099081|-1.25291726027916
hsa-miR-4747-5p acatgaaCTTCCCag AGGGAAGG m6b Disrupted HHHSE_3728_CHD9|NM_025134|exon_CDS|-7.68975469099081|-1.25291726027916
hsa-miR-5196-5p acatgaaCTTCCCag AGGGAAGG m6b Disrupted HHHSE_3728_CHD9|NM_025134|exon_CDS|-7.68975469099081|-1.25291726027916

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53157030A>G COSM1201026 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7854-3p TCACCTCAtagagga UGAGGUGA m8a Disrupted HPSLC_7538_G8913.1_53190935

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53156951C>T COSM2834840 HT29 [lung][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3169 tctacttCAGTCCTc UAGGACUG m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-4740-5p tctactTCAGTCCTc AGGACUGA m8a Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-4759 tctacttTAGTCCTc UAGGACUA m7b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-548a-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-548ab tcTACTTTagtcctc AAAAGUAA m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-548ad-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-548ae-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-548ak tcTACTTTagtcctc AAAAGUAA m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-548am-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-562 tCTACTTTagtcctc AAAGUAGC m7a Created HHFCT_59036_cluster-8603_3_41
hsa-miR-8054 tcTACTTTagtcctc GAAAGUAC m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-3169 tctacttCAGTCCTc UAGGACUG m7b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-4740-5p tctactTCAGTCCTc AGGACUGA m8a Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-4759 tctacttTAGTCCTc UAGGACUA m7b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-548a-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-548ab tcTACTTTagtcctc AAAAGUAA m6b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-548ad-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-548ae-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-548ak tcTACTTTagtcctc AAAAGUAA m6b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-548am-5p tcTACTTTagtcctc AAAAGUAA m6b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-562 tCTACTTTagtcctc AAAGUAGC m7a Created HHFKP_56294_cluster-8603_7_114
hsa-miR-8054 tcTACTTTagtcctc GAAAGUAC m6b Created HHFKP_56294_cluster-8603_7_114

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53156942A>C COSM4898430 TCGA-EE-A3JB-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-151a-3p accaaaCAGTCTAct CUAGACUG m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-4463 accaaaCAGTCTact GAGACUGG m6b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-4499 accaaaCAGTCTact AAGACUGA m6b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-452-5p accAAACAGTctact AACUGUUU m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-4676-3p accAAACAGTctact CACUGUUU m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-483-5p accaaaCCGTCTact AAGACGGG m6b Created HHFCT_59036_cluster-8603_3_41
hsa-miR-892c-3p accAAACAGTctact CACUGUUU m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-151a-3p accaaaCAGTCTAct CUAGACUG m7b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-4463 accaaaCAGTCTact GAGACUGG m6b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-4499 accaaaCAGTCTact AAGACUGA m6b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-452-5p accAAACAGTctact AACUGUUU m7b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-4676-3p accAAACAGTctact CACUGUUU m7b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-483-5p accaaaCCGTCTact AAGACGGG m6b Created HHFKP_56294_cluster-8603_7_114
hsa-miR-892c-3p accAAACAGTctact CACUGUUU m7b Disrupted HHFKP_56294_cluster-8603_7_114

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53156931T>G COSM3888645 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3689a-5p aatcatATATCACca UGUGAUAU m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-3689b-5p aatcatATATCACca UGUGAUAU m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-3689e aatcatATATCACca UGUGAUAU m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-3689f aatcatATATCACca UGUGAUAU m7b Disrupted HHFCT_59036_cluster-8603_3_41
hsa-miR-3689a-5p aatcatATATCACca UGUGAUAU m7b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-3689b-5p aatcatATATCACca UGUGAUAU m7b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-3689e aatcatATATCACca UGUGAUAU m7b Disrupted HHFKP_56294_cluster-8603_7_114
hsa-miR-3689f aatcatATATCACca UGUGAUAU m7b Disrupted HHFKP_56294_cluster-8603_7_114

Mutation Mutation ID Sample Name Cancer Type
chr16:g.53156928A>G COSM3957643 J63_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7d-3p agtaaTCGTATAtca CUAUACGA m7b Created HHFCT_59036_cluster-8603_3_41
hsa-let-7d-3p agtaaTCGTATAtca CUAUACGA m7b Created HHFKP_56294_cluster-8603_7_114
Mutation Mutation ID Sample Name Cancer Type
chr16:g.53156757A>G COSM1638240 PD7299a [bone][femur][chondrosarcoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.53156201G>T COSM369391 LUAD-NYU1124 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4275 agttgatTAATTGaa CCAAUUAC m6b Created HHFKP_56293_cluster-8603_6_37
hsa-miR-4760-3p agttgATGAATTgaa AAAUUCAU m7b Disrupted HHFKP_56293_cluster-8603_6_37

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser