SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002113
Gene Symbol: CFHR1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.196831866A>G COSM424926 TCGA-AR-A1AH-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3182 aaACAGAAGCtttat GCUUCUGU m8a Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-320a aaacagaAGCTTTat AAAAGCUG m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-320b aaacagaAGCTTTat AAAAGCUG m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-320c aaacagaAGCTTTat AAAAGCUG m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-320d aaacagaAGCTTTat AAAAGCUG m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-4429 aaacagaAGCTTTat AAAAGCUG m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6819-3p aaacAGAGGCTTtat AAGCCUCU m8a Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6877-3p aaacAGAGGCTttat CAGCCUCU m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-7109-3p aaacaGAGGCTTtat CAAGCCUC m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-9-3p aaacagaAGCTTTAt AUAAAGCU m7b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196831865A>T COSM368444 LUAD-NYU1051S [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3182 caaACAGAAGCttta GCUUCUGU m8a Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-452-5p cAAACAGTagcttta AACUGUUU m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-4652-3p caAACAGAAgcttta GUUCUGUU m7b (m7b->m6b) HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-4676-3p cAAACAGTagcttta CACUGUUU m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-892c-3p cAAACAGTagcttta CACUGUUU m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196831858C>A COSM331154 LUAD-B00416 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-5p ggacaGCAAAACaga AGUUUUGC m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-19b-1-5p ggacaGCAAAACaga AGUUUUGC m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-19b-2-5p ggacaGCAAAACaga AGUUUUGC m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-4687-3p ggACAGCCAaacaga UGGCUGUU m7a (m7a->m6a) HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-647 ggaCAGCCAaacaga GUGGCUGC m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6740-5p ggacagCCAAACaga AGUUUGGG m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6842-3p ggaCAGCCAAacaga UUGGCUGG m7a Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6885-3p ggacAGCAAAacaga CUUUGCUU m6b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-7974 ggACAGCCaaacaga AGGCUGUG m6b Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196831825G>A COSM3480851 TCGA-EE-A2GI-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4482-3p aaattATAGAAAatt UUUCUAUU m7a Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-587 aaatTATGGAAAatt UUUCCAUA m8a Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-7159-3p aaattATAGAAAatt UUUCUAUG m7a Created HHRBL_1430_BCBL1-2of3-SCL_7417

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196831824T>A COSM400417 LUAD-2GUGK [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-587 gaaatTATGGAAAat UUUCCAUA m8a Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196831821T>G COSM4671851 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p cgagaAAGTATGgaa ACAUACUU m7b Created HHRBL_1430_BCBL1-2of3-SCL_7417

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196831815G>A COSM3480850 TCGA-EB-A3XB-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5089-5p atATCCCAagaaatt GUGGGAUU m6b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-578 atatccCAAGAAatt CUUCUUGU m6b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-635 atatCCCAAGaaatt ACUUGGGC m6b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6513-5p atATCCCAAgaaatt UUUGGGAU m7b (m6b->m7b) HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6771-5p ataTCCCGAGaaatt CUCGGGAG m7a Disrupted HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-6774-5p atatCCCAAGaaatt ACUUGGGC m6b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-769-3p atATCCCAagaaatt CUGGGAUC m6b Created HHRBL_1430_BCBL1-2of3-SCL_7417
hsa-miR-887-5p ataTCCCAAGaaatt CUUGGGAG m7a Created HHRBL_1430_BCBL1-2of3-SCL_7417

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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