SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0040540
Gene Symbol: CFDP1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.75414655G>T COSM3742042 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p tagtgaaGGAAGATg CAUCUUCC m7b Disrupted HHFCT_56929_cluster-9190_27_6
hsa-miR-205-5p tagTGAAGGAagatg UCCUUCAU m7a Disrupted HHFCT_56929_cluster-9190_27_6
hsa-miR-6837-3p tAGTGAAGGaagatg CCUUCACU m8a (m8a->m7a) HHFCT_56929_cluster-9190_27_6

Mutation Mutation ID Sample Name Cancer Type
chr16:g.75414643G>T COSM472111 TCGA-B2-3924-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4436b-5p atgAAGTGGAtggtg GUCCACUU m7b Disrupted HHFCT_56929_cluster-9190_27_6

Mutation Mutation ID Sample Name Cancer Type
chr16:g.75414623A>T COSM175441 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-3p cagacACTGAAAacc CUUUCAGU m7b Created HHFCT_56929_cluster-9190_27_6
hsa-miR-30d-3p cagacACTGAAAacc CUUUCAGU m7b Created HHFCT_56929_cluster-9190_27_6
hsa-miR-30e-3p cagacACTGAAAacc CUUUCAGU m7b Created HHFCT_56929_cluster-9190_27_6
hsa-miR-4276 cagaCACTGAaaacc CUCAGUGA m6b Created HHFCT_56929_cluster-9190_27_6
hsa-miR-4302 cagACACTGaaaacc CCAGUGUG m6b Created HHFCT_56929_cluster-9190_27_6
hsa-miR-4652-3p cagacACAGAAaacc GUUCUGUU m6b Disrupted HHFCT_56929_cluster-9190_27_6
hsa-miR-4743-3p cagacACAGAAAacc UUUCUGUC m7a Disrupted HHFCT_56929_cluster-9190_27_6
hsa-miR-6733-3p caGACACTGAaaacc UCAGUGUC m8a Created HHFCT_56929_cluster-9190_27_6

Mutation Mutation ID Sample Name Cancer Type
chr16:g.75305061G>T COSM3717085 HCC46 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-412-3p ggggattGGTGAAGa ACUUCACC m7b Disrupted HHFCT_56908_cluster-9190_6_12
hsa-miR-4719 ggggATTTGTGAaga UCACAAAU m8a Created HHFCT_56908_cluster-9190_6_12
hsa-miR-605-5p gGGGATTTgtgaaga UAAAUCCC m7b Created HHFCT_56908_cluster-9190_6_12
hsa-miR-6754-3p ggggattGGTGAAGa UCUUCACC m7b Disrupted HHFCT_56908_cluster-9190_6_12

Mutation Mutation ID Sample Name Cancer Type
chr16:g.75293999C>A COSM4608631 2293782 [adrenal_gland][adrenal_gland][adrenal_cortical_carcinoma][functioning]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548av-3p tcacagGCAGTTTga AAAACUGC m7b Disrupted HHFCT_56906_cluster-9190_4_13
hsa-miR-6514-3p tcACAGGCAGtttga CUGCCUGU m8a Disrupted HHFCT_56906_cluster-9190_4_13
hsa-miR-6811-3p tCACAGGCagtttga AGCCUGUG m7b Disrupted HHFCT_56906_cluster-9190_4_13
hsa-miR-7152-5p tcACAGGAAgtttga UUUCCUGU m7b (m6b->m7b) HHFCT_56906_cluster-9190_4_13

Mutation Mutation ID Sample Name Cancer Type
chr16:g.75293984C>T COSM1709400 YUBOO [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p aattgaGTGAGATCt GAUCUCAC m8a Created HHFCT_56906_cluster-9190_4_13
hsa-miR-4695-3p aattgagTGAGATCt UGAUCUCA m7b Created HHFCT_56906_cluster-9190_4_13
hsa-miR-6794-3p aattGAGTGAGatct CUCACUCU m7a Created HHFCT_56906_cluster-9190_4_13
hsa-miR-7158-5p aATTGAGCgagatct GGCUCAAU m7b Disrupted HHFCT_56906_cluster-9190_4_13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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