SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_016343
Gene Symbol: CENPF
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620854C>T COSM903738 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p cgatcaATTTTGCaa AGCAAAAU m7b Created HHFCT_14894_uc001hkm.1_9_21
hsa-miR-518a-5p cgatcaaCTTTGCAa CUGCAAAG m7b Disrupted HHFCT_14894_uc001hkm.1_9_21
hsa-miR-527 cgatcaaCTTTGCAa CUGCAAAG m7b Disrupted HHFCT_14894_uc001hkm.1_9_21
hsa-miR-548aj-5p cgatcaaTTTTGCAa UGCAAAAG m7a Created HHFCT_14894_uc001hkm.1_9_21
hsa-miR-548aw cgatcaaTTTTGCAa GUGCAAAA m7b Created HHFCT_14894_uc001hkm.1_9_21
hsa-miR-548f-5p cgatcaaTTTTGCAa UGCAAAAG m7a Created HHFCT_14894_uc001hkm.1_9_21
hsa-miR-548g-5p cgatcaaTTTTGCAa UGCAAAAG m7a Created HHFCT_14894_uc001hkm.1_9_21
hsa-miR-548x-5p cgatcaaTTTTGCAa UGCAAAAG m7a Created HHFCT_14894_uc001hkm.1_9_21

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620848G>A COSM4028002 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-5p ccaaGTCGATCaact AGAUCGAC m7b Disrupted HHFCT_14894_uc001hkm.1_9_21

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620767C>T COSM414632 TCGA-DK-A1A5-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-577 catctTTTATCTAat UAGAUAAA m8a Created HPRO6_4259_G5011.1_214794119

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620713A>G COSM1668458 SN12C [kidney][NS][carcinoma][renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4293 cggcaTCAGGCTtca CAGCCUGA m7b Disrupted HPRO6_4258_G5010.1_214794057

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620708G>A COSM266229 TCGA-AA-3672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219b-5p ttgcccGACATCagg AGAUGUCC m6b Created HPRO6_4258_G5010.1_214794057

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620706C>T COSM159939 PD4203a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4645-5p catTGCCTGGcatca ACCAGGCA m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-4673 catTGCCTGGcatca UCCAGGCA m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-4742-5p caTTGCCTGgcatca UCAGGCAA m7b (m6b->m7b) HHFCT_14892_uc001hkm.1_7_54
hsa-miR-4755-3p cattGCCTGGCatca AGCCAGGC m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-5006-5p cattgCCTGGCAtca UUGCCAGG m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-4645-5p catTGCCTGGcatca ACCAGGCA m7b Created HPRO6_4258_G5010.1_214794057
hsa-miR-4673 catTGCCTGGcatca UCCAGGCA m7b Created HPRO6_4258_G5010.1_214794057
hsa-miR-4742-5p caTTGCCTGgcatca UCAGGCAA m7b (m6b->m7b) HPRO6_4258_G5010.1_214794057
hsa-miR-4755-3p cattGCCTGGCatca AGCCAGGC m7b Created HPRO6_4258_G5010.1_214794057
hsa-miR-5006-5p cattgCCTGGCAtca UUGCCAGG m7b Created HPRO6_4258_G5010.1_214794057

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620705C>G COSM3705478 HCC76 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3648 acattgCGCGGCatc AGCCGCGG m6b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-6869-3p acattGCGCGGCatc CGCCGCGC m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-3648 acattgCGCGGCatc AGCCGCGG m6b Created HPRO6_4258_G5010.1_214794057
hsa-miR-6869-3p acattGCGCGGCatc CGCCGCGC m7b Created HPRO6_4258_G5010.1_214794057

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620703G>T COSM4848104 TCGA-EA-A4BA-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5093 cgaCATTTCCcggca AGGAAAUG m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-5093 cgaCATTTCCcggca AGGAAAUG m7b Created HPRO6_4258_G5010.1_214794057

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620697G>A COSM3418728 TCGA-EI-6917-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-409-3p tcaccgCAACATTgc GAAUGUUG m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-409-3p tcaccgCAACATTgc GAAUGUUG m7b Created HPRO6_4258_G5010.1_214794057

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620695G>A COSM1930769 AOCS-152-1-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4440 aatcaCCACGACAtt UGUCGUGG m8a Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-598-5p aATCACCGCgacatt GCGGUGAU m8a (m8a->m7a) HHFCT_14892_uc001hkm.1_7_54

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214620678A>T COSM4983881 3N57-VS-3T57 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p ttccaCATGCCacca AGGCAUGG m6b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-4491 tTCCACATgccacca AAUGUGGA m7b Created HHFCT_14892_uc001hkm.1_7_54
hsa-miR-4657 tTCCACATgccacca AAUGUGGA m7b Created HHFCT_14892_uc001hkm.1_7_54

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618669A>G COSM4576880 CHEWS015 [bone][pelvis][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3681-5p caacTCCACTAacac UAGUGGAU m7a Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4460 caactCCACTAacac AUAGUGGU m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4727-3p caactCCACTAacac AUAGUGGG m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-6849-5p caacTCCACTaacac GAGUGGAU m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-7846-3p caaCTCCGCTaacac CAGCGGAG m7b Created HHFCT_14891_uc001hkm.1_6_20
hsa-miR-3681-5p caacTCCACTAacac UAGUGGAU m7a Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-4460 caactCCACTAacac AUAGUGGU m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-4727-3p caactCCACTAacac AUAGUGGG m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-6849-5p caacTCCACTaacac GAGUGGAU m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-7846-3p caaCTCCGCTaacac CAGCGGAG m7b Created HPCB3_1091_G1504.1_214792023
hsa-miR-3681-5p caacTCCACTAacac UAGUGGAU m7a Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-4460 caactCCACTAacac AUAGUGGU m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-4727-3p caactCCACTAacac AUAGUGGG m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-6849-5p caacTCCACTaacac GAGUGGAU m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-7846-3p caaCTCCGCTaacac CAGCGGAG m7b Created HPRO6_4257_G5009.1_214792009
hsa-miR-3681-5p caacTCCACTAacac UAGUGGAU m7a Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-4460 caactCCACTAacac AUAGUGGU m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-4727-3p caactCCACTAacac AUAGUGGG m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-6849-5p caacTCCACTaacac GAGUGGAU m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-7846-3p caaCTCCGCTaacac CAGCGGAG m7b Created HPSEF_1175_G1386.1_214791993

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618668C>T COSM4027999 TCGA-BR-4201-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-1-3p aCAACTCTactaaca AGAGUUGA m7a Created HHFCT_14891_uc001hkm.1_6_20
hsa-miR-3681-5p acaacTCCACTAaca UAGUGGAU m7a Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-411-5p acaacTCTACTAaca UAGUAGAC m7a Created HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4460 acaactCCACTAaca AUAGUGGU m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4727-3p acaactCCACTAaca AUAGUGGG m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-6832-5p acaaCTCTACTaaca AGUAGAGA m7a Created HHFCT_14891_uc001hkm.1_6_20
hsa-miR-6849-5p acaacTCCACTaaca GAGUGGAU m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-219a-1-3p aCAACTCTactaaca AGAGUUGA m7a Created HPCB3_1091_G1504.1_214792023
hsa-miR-3681-5p acaacTCCACTAaca UAGUGGAU m7a Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-411-5p acaacTCTACTAaca UAGUAGAC m7a Created HPCB3_1091_G1504.1_214792023
hsa-miR-4460 acaactCCACTAaca AUAGUGGU m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-4727-3p acaactCCACTAaca AUAGUGGG m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-6832-5p acaaCTCTACTaaca AGUAGAGA m7a Created HPCB3_1091_G1504.1_214792023
hsa-miR-6849-5p acaacTCCACTaaca GAGUGGAU m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-219a-1-3p aCAACTCTactaaca AGAGUUGA m7a Created HPRO6_4257_G5009.1_214792009
hsa-miR-3681-5p acaacTCCACTAaca UAGUGGAU m7a Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-411-5p acaacTCTACTAaca UAGUAGAC m7a Created HPRO6_4257_G5009.1_214792009
hsa-miR-4460 acaactCCACTAaca AUAGUGGU m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-4727-3p acaactCCACTAaca AUAGUGGG m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-6832-5p acaaCTCTACTaaca AGUAGAGA m7a Created HPRO6_4257_G5009.1_214792009
hsa-miR-6849-5p acaacTCCACTaaca GAGUGGAU m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-219a-1-3p aCAACTCTactaaca AGAGUUGA m7a Created HPSEF_1175_G1386.1_214791993
hsa-miR-3681-5p acaacTCCACTAaca UAGUGGAU m7a Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-411-5p acaacTCTACTAaca UAGUAGAC m7a Created HPSEF_1175_G1386.1_214791993
hsa-miR-4460 acaactCCACTAaca AUAGUGGU m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-4727-3p acaactCCACTAaca AUAGUGGG m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-6832-5p acaaCTCTACTaaca AGUAGAGA m7a Created HPSEF_1175_G1386.1_214791993
hsa-miR-6849-5p acaacTCCACTaaca GAGUGGAU m6b Disrupted HPSEF_1175_G1386.1_214791993

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618667C>A COSM903734 TCGA-B5-A0JV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3591-5p tacaactACACTAAc UUUAGUGU m7b Created HPRO6_4257_G5009.1_214792009
hsa-miR-3681-5p tacaacTCCACTAac UAGUGGAU m7a Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-4280 tacaaCTACACTaac GAGUGUAG m7b Created HPRO6_4257_G5009.1_214792009
hsa-miR-4460 tacaactCCACTAac AUAGUGGU m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-4703-3p taCAACTACActaac UGUAGUUG m8a Created HPRO6_4257_G5009.1_214792009
hsa-miR-4727-3p tacaactCCACTAac AUAGUGGG m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-6849-5p tacaacTCCACTaac GAGUGGAU m6b Disrupted HPRO6_4257_G5009.1_214792009
hsa-miR-3591-5p tacaactACACTAAc UUUAGUGU m7b Created HPSEF_1175_G1386.1_214791993
hsa-miR-3681-5p tacaacTCCACTAac UAGUGGAU m7a Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-4280 tacaaCTACACTaac GAGUGUAG m7b Created HPSEF_1175_G1386.1_214791993
hsa-miR-4460 tacaactCCACTAac AUAGUGGU m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-4703-3p taCAACTACActaac UGUAGUUG m8a Created HPSEF_1175_G1386.1_214791993
hsa-miR-4727-3p tacaactCCACTAac AUAGUGGG m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-6849-5p tacaacTCCACTaac GAGUGGAU m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-3591-5p tacaactACACTAAc UUUAGUGU m7b Created HHFCT_14891_uc001hkm.1_6_20
hsa-miR-3681-5p tacaacTCCACTAac UAGUGGAU m7a Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4280 tacaaCTACACTaac GAGUGUAG m7b Created HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4460 tacaactCCACTAac AUAGUGGU m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4703-3p taCAACTACActaac UGUAGUUG m8a Created HHFCT_14891_uc001hkm.1_6_20
hsa-miR-4727-3p tacaactCCACTAac AUAGUGGG m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-6849-5p tacaacTCCACTaac GAGUGGAU m6b Disrupted HHFCT_14891_uc001hkm.1_6_20
hsa-miR-3591-5p tacaactACACTAAc UUUAGUGU m7b Created HPCB3_1091_G1504.1_214792023
hsa-miR-3681-5p tacaacTCCACTAac UAGUGGAU m7a Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-4280 tacaaCTACACTaac GAGUGUAG m7b Created HPCB3_1091_G1504.1_214792023
hsa-miR-4460 tacaactCCACTAac AUAGUGGU m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-4703-3p taCAACTACActaac UGUAGUUG m8a Created HPCB3_1091_G1504.1_214792023
hsa-miR-4727-3p tacaactCCACTAac AUAGUGGG m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-6849-5p tacaacTCCACTaac GAGUGGAU m6b Disrupted HPCB3_1091_G1504.1_214792023

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618657T>G COSM4629289 HCA46 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPCB3_1091_G1504.1_214792023
hsa-miR-30b-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPCB3_1091_G1504.1_214792023
hsa-miR-30c-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPCB3_1091_G1504.1_214792023
hsa-miR-30d-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPCB3_1091_G1504.1_214792023
hsa-miR-30e-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPCB3_1091_G1504.1_214792023
hsa-miR-4282 aaaAAATTTTtacaa UAAAAUUU m7b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-543 aaaaAATGTTTacaa AAACAUUC m7a Created HPCB3_1091_G1504.1_214792023
hsa-miR-548c-3p aaaaaATTTTTacaa CAAAAAUC m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-30a-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPSEF_1175_G1386.1_214791993
hsa-miR-30b-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPSEF_1175_G1386.1_214791993
hsa-miR-30c-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPSEF_1175_G1386.1_214791993
hsa-miR-30d-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPSEF_1175_G1386.1_214791993
hsa-miR-30e-5p aaaaaaTGTTTACAa UGUAAACA m8a Created HPSEF_1175_G1386.1_214791993
hsa-miR-4282 aaaAAATTTTtacaa UAAAAUUU m7b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-543 aaaaAATGTTTacaa AAACAUUC m7a Created HPSEF_1175_G1386.1_214791993
hsa-miR-548c-3p aaaaaATTTTTacaa CAAAAAUC m6b Disrupted HPSEF_1175_G1386.1_214791993

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618655A>T COSM4641658 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4282 acaaaAAATTTTtac UAAAAUUU m7b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-548c-3p acaaaaaATTTTTac CAAAAAUC m6b Disrupted HPCB3_1091_G1504.1_214792023
hsa-miR-4282 acaaaAAATTTTtac UAAAAUUU m7b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-548c-3p acaaaaaATTTTTac CAAAAAUC m6b Disrupted HPSEF_1175_G1386.1_214791993

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618653A>C COSM209870 TCGA-AA-3555-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p ccaCAAAAAattttt CUUUUUGC m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-4282 ccacaaaAAATTTTt UAAAAUUU m7b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-5010-3p cCACAAAAaattttt UUUUGUGU m7a Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-8068 ccACAAACAattttt UGUUUGUU m7a (m6a->m7a) HPSEF_1175_G1386.1_214791993

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618649CA>C COSM1338755 TCGA-AA-3815-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p tacaccaCAAAAAatt CUUUUUGC m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-2113 tacacCACAAAaaatt AUUUGUGC m6b Disrupted HPSEF_1175_G1386.1_214791993
hsa-miR-5010-3p tacacCACAAAAaatt UUUUGUGU m7a Disrupted HPSEF_1175_G1386.1_214791993

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618634C>T COSM3483250 TCGA-ER-A19F-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1246 tctgAATCCATgcaa AAUGGAUU m7b Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-4320 tctGAATCCatgcaa GGGAUUCU m6b Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-4452 tctGAATTCAtgcaa UUGAAUUC m7b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-490-5p tctgaATCCATGcaa CCAUGGAU m7b Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-5011-3p tctgaatCCATGCAa GUGCAUGG m7b Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-6076 tctgaatTCATGCaa AGCAUGAC m6b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-6797-3p tctgaatTCATGCAa UGCAUGAC m7a Created HHFCT_14890_uc001hkm.1_5_33

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618618A>T COSM532336 TCGA-05-4249-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 agtCTGCAGatgtct CCUGCAGC m6b Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-1273h-3p aGTCTGCAGatgtct CUGCAGAC m8a (m8a->m7a) HHFCT_14890_uc001hkm.1_5_33
hsa-miR-17-3p agtCTGCAGatgtct ACUGCAGU m6b Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-214-3p agtCTGCTGatgtct ACAGCAGG m6b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-3158-5p agTCTGCAGatgtct CCUGCAGA m7b (m7b->m6b) HHFCT_14890_uc001hkm.1_5_33
hsa-miR-3617-3p agtcTGCTGATGtct CAUCAGCA m8a Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-3678-3p agTCTGCAGatgtct CUGCAGAG m7a (m7a->m6a) HHFCT_14890_uc001hkm.1_5_33
hsa-miR-3913-3p agtctgcTGATGTCt AGACAUCA m7b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-4291 agtCTGCTGAtgtct UUCAGCAG m7b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-4771 AGTCTGCTgatgtct AGCAGACU m8a Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-761 agtCTGCTGatgtct GCAGCAGG m6b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-922 agTCTGCTGatgtct GCAGCAGA m7b (m6b->m7b) HHFCT_14890_uc001hkm.1_5_33

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618609G>A COSM903733 T36 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1301-3p aAGCTGCAcagtctg UUGCAGCU m7b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-143-5p aagCTGCACagtctg GGUGCAGU m6b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-3944-5p aaGCTGCACAgtctg UGUGCAGC m8a Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-5047 aAGCTGCAcagtctg UUGCAGCU m7b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-1301-3p aAGCTGCAcagtctg UUGCAGCU m7b Created HHFKP_14639_uc001hkm.1_5_399
hsa-miR-143-5p aagCTGCACagtctg GGUGCAGU m6b Created HHFKP_14639_uc001hkm.1_5_399
hsa-miR-3944-5p aaGCTGCACAgtctg UGUGCAGC m8a Created HHFKP_14639_uc001hkm.1_5_399
hsa-miR-5047 aAGCTGCAcagtctg UUGCAGCU m7b Created HHFKP_14639_uc001hkm.1_5_399

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214618593G>T COSM903732 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p cttgaAAGAAGCcaa AGCUUCUU m7b Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-205-3p ctTGAAATaagccaa GAUUUCAG m6b Created HHFCT_14890_uc001hkm.1_5_33
hsa-miR-6815-3p cttgaaAGAAGCCAa UGGCUUCU m8a Disrupted HHFCT_14890_uc001hkm.1_5_33
hsa-miR-103a-2-5p cttgaAAGAAGCcaa AGCUUCUU m7b Disrupted HHFKP_14639_uc001hkm.1_5_399
hsa-miR-205-3p ctTGAAATaagccaa GAUUUCAG m6b Created HHFKP_14639_uc001hkm.1_5_399
hsa-miR-6815-3p cttgaaAGAAGCCAa UGGCUUCU m8a Disrupted HHFKP_14639_uc001hkm.1_5_399

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214615018G>A COSM1338754 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p ggaacagGAACTTaa AAAGUUCU m6b Disrupted HHFKP_14637_uc001hkm.1_3_30
hsa-miR-4652-3p ggAACAGAAacttaa GUUCUGUU m7b (m6b->m7b) HHFKP_14637_uc001hkm.1_3_30
hsa-miR-7152-5p ggaACAGGAActtaa UUUCCUGU m7b Disrupted HHFKP_14637_uc001hkm.1_3_30

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214615008A>T COSM1200738 587338 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-5p tagaaaAACTGGAac GUCCAGUU m7b Disrupted HHFKP_14637_uc001hkm.1_3_30
hsa-miR-3180-5p tagaaaaTCTGGAAc CUUCCAGA m7b Created HHFKP_14637_uc001hkm.1_3_30
hsa-miR-4328 tagaAAAACTGGaac CCAGUUUU m8a Disrupted HHFKP_14637_uc001hkm.1_3_30
hsa-miR-488-5p tagaaaATCTGGaac CCCAGAUA m6b Created HHFKP_14637_uc001hkm.1_3_30
hsa-miR-5195-3p tagaaaAACTGGAac AUCCAGUU m7b Disrupted HHFKP_14637_uc001hkm.1_3_30
hsa-miR-520a-5p tagaaaaTCTGGAac CUCCAGAG m6b Created HHFKP_14637_uc001hkm.1_3_30
hsa-miR-525-5p tagaaaaTCTGGAac CUCCAGAG m6b Created HHFKP_14637_uc001hkm.1_3_30

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214613905CA>C COSM1240995 ESO-0292 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p gcagaaGCAAAAAcag CUUUUUGC m7b Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-19a-5p gcagaaGCAAAACag AGUUUUGC m7b Created HHFKP_14636_uc001hkm.1_2_186
hsa-miR-19b-1-5p gcagaaGCAAAACag AGUUUUGC m7b Created HHFKP_14636_uc001hkm.1_2_186
hsa-miR-19b-2-5p gcagaaGCAAAACag AGUUUUGC m7b Created HHFKP_14636_uc001hkm.1_2_186
hsa-miR-2052 gcagaagCAAAACAg UGUUUUGA m7a Created HHFKP_14636_uc001hkm.1_2_186
hsa-miR-3182 gCAGAAGCaaaaacag GCUUCUGU m7a Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-3977 gcaGAAGCAaaaacag GUGCUUCA m6b Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-6885-3p gcagAAGCAAAaacag CUUUGCUU m7b Disrupted HHFKP_14636_uc001hkm.1_2_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214613897T>C COSM1338752 TCGA-A6-3809-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 gctgcGCTGCAGaag CCUGCAGC m7b Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-1205 gctgcgCTGCAGAag UCUGCAGG m7a Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-17-3p gctgcgCTGCAGaag ACUGCAGU m6b Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-3158-5p gctgcgCTGCAGaag CCUGCAGA m6b Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-3960 gctgCGCCGCagaag GGCGGCGG m6b Created HHFKP_14636_uc001hkm.1_2_186
hsa-miR-4734 gctgcgCCGCAGaag GCUGCGGG m6b Created HHFKP_14636_uc001hkm.1_2_186
hsa-miR-544a gctgcgcTGCAGAAg AUUCUGCA m7b Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-7156-3p gctgcGCTGCAGaag CUGCAGCC m7a Disrupted HHFKP_14636_uc001hkm.1_2_186
hsa-miR-8072 gctgCGCCGCagaag GGCGGCGG m6b Created HHFKP_14636_uc001hkm.1_2_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214613887G>A COSM903729 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3672 cAGTCTCAaggctgc AUGAGACU m7b Created HHFCT_14887_uc001hkm.1_2_27
hsa-miR-6864-3p cAGTCTCAaggctgc GUGAGACU m7b Created HHFCT_14887_uc001hkm.1_2_27
hsa-miR-3672 cAGTCTCAaggctgc AUGAGACU m7b Created HHFKP_14636_uc001hkm.1_2_186
hsa-miR-6864-3p cAGTCTCAaggctgc GUGAGACU m7b Created HHFKP_14636_uc001hkm.1_2_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214613882G>T COSM903728 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-513b-3p ctTGACATTctcgag AAAUGUCA m7b (m6b->m7b) HHFCT_14887_uc001hkm.1_2_27
hsa-miR-873-3p cttgaCAGTCTCgag GGAGACUG m7b Disrupted HHFCT_14887_uc001hkm.1_2_27
hsa-miR-513b-3p ctTGACATTctcgag AAAUGUCA m7b (m6b->m7b) HHFKP_14636_uc001hkm.1_2_186
hsa-miR-873-3p cttgaCAGTCTCgag GGAGACUG m7b Disrupted HHFKP_14636_uc001hkm.1_2_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214613858A>G COSM1338751 TCGA-D5-6540-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6743-3p gaaaAGCGGCaaagg AGCCGCUC m6b Created HHFCT_14886_uc001hkm.1_1_21

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214613857C>A COSM1338750 TCGA-AA-3660-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p ggaaAAGAAGCaaag AGCUUCUU m7b Created HHFCT_14886_uc001hkm.1_1_21
hsa-miR-3140-3p ggAAAAGCagcaaag AGCUUUUG m6b Disrupted HHFCT_14886_uc001hkm.1_1_21
hsa-miR-3977 ggaaaaGAAGCAaag GUGCUUCA m6b Created HHFCT_14886_uc001hkm.1_1_21
hsa-miR-6885-3p ggaaaagAAGCAAAg CUUUGCUU m7b Created HHFCT_14886_uc001hkm.1_1_21

Mutation Mutation ID Sample Name Cancer Type
chr1:g.214613840A>C COSM1668457 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4276 cttgacaCACTGAag CUCAGUGA m6b Created HHFCT_14886_uc001hkm.1_1_21
hsa-miR-4302 cttgaCACACTGaag CCAGUGUG m7b Created HHFCT_14886_uc001hkm.1_1_21
hsa-miR-4328 cttgacAAACTGaag CCAGUUUU m6b Disrupted HHFCT_14886_uc001hkm.1_1_21
hsa-miR-592 ctTGACACActgaag UUGUGUCA m7b (m6b->m7b) HHFCT_14886_uc001hkm.1_1_21
hsa-miR-6733-3p cttgacACACTGAag UCAGUGUC m7a Created HHFCT_14886_uc001hkm.1_1_21
hsa-miR-4276 cttgacaCACTGAag CUCAGUGA m6b Created HHFKP_14635_uc001hkm.1_1_37
hsa-miR-4302 cttgaCACACTGaag CCAGUGUG m7b Created HHFKP_14635_uc001hkm.1_1_37
hsa-miR-4328 cttgacAAACTGaag CCAGUUUU m6b Disrupted HHFKP_14635_uc001hkm.1_1_37
hsa-miR-592 ctTGACACActgaag UUGUGUCA m7b (m6b->m7b) HHFKP_14635_uc001hkm.1_1_37
hsa-miR-6733-3p cttgacACACTGAag UCAGUGUC m7a Created HHFKP_14635_uc001hkm.1_1_37

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser