SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0075808
Gene Symbol: CDKAL1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.20739615G>A COSM2856413 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-5p tcaTTGGAGTaagct AACUCCAA m7b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-508-5p tcatTGGAGTAagct UACUCCAG m7a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-550b-3p tcattgGAGTAAGct UCUUACUC m7b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-5695 tcaTTGGAGTaagct ACUCCAAG m7a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-6798-3p tcattGGGGTAagct CUACCCCC m6b Disrupted HHFKP_126046_cluster-19031_11_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20739595A>G COSM2856412 TC71 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4761-5p ctACCTTGagggact ACAAGGUG m6b Created HHFKP_126046_cluster-19031_11_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20739589T>C COSM1200583 587284 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-5p ccaggacCACCTTAa UAAGGUGC m7a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-18b-5p ccaggacCACCTTAa UAAGGUGC m7a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-196a-5p ccaggACTACCTtaa UAGGUAGU m7b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-196b-5p ccaggACTACCTtaa UAGGUAGU m7b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-323a-5p ccagGACCACCTtaa AGGUGGUC m8a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-4540 ccAGGACTAccttaa UUAGUCCU m7b (m7b->m6b) HHFKP_126046_cluster-19031_11_8
hsa-miR-4735-3p ccaggacCACCTTaa AAAGGUGC m6b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-548ag ccaggacTACCTTaa AAAGGUAA m6b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-548ai ccaggacTACCTTaa AAAGGUAA m6b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-548ba ccaggacTACCTTaa AAAGGUAA m6b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-570-5p ccaggacTACCTTaa AAAGGUAA m6b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-6838-3p cCAGGACTaccttaa AAGUCCUG m7b Disrupted HHFKP_126046_cluster-19031_11_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20739581G>T COSM2856410 CPCG0183-P2 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p cagcctcGCCAGGac ACCUGGCA m6b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-3690 cagcctcTCCAGGac ACCUGGAC m6b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-4254 cagcctCTCCAGGac GCCUGGAG m7b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-485-5p CAGCCTCTccaggac AGAGGCUG m8a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-5192 cagcCTCTCCaggac AGGAGAGU m6b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-6884-5p CAGCCTCTccaggac AGAGGCUG m8a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-8073 cagcctcGCCAGGac ACCUGGCA m6b Disrupted HHFKP_126046_cluster-19031_11_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20739581G>A COSM266217 TCGA-AA-3672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p cagcctcGCCAGGac ACCUGGCA m6b Disrupted HHFKP_126046_cluster-19031_11_8
hsa-miR-4299 cagccTCACCAGgac GCUGGUGA m7b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-4316 caGCCTCACCaggac GGUGAGGC m8a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-4456 cagcctCACCAGGac CCUGGUGG m7a Created HHFKP_126046_cluster-19031_11_8
hsa-miR-4710 cagCCTCACCaggac GGGUGAGG m7b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-4792 cagcCTCACCaggac CGGUGAGC m6b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-7855-5p cagcCTCACCAggac UUGGUGAG m7b Created HHFKP_126046_cluster-19031_11_8
hsa-miR-8073 cagcctcGCCAGGac ACCUGGCA m6b Disrupted HHFKP_126046_cluster-19031_11_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20717949C>G COSN2155572 RK021_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1205 gcagCCTGCAGgtct UCUGCAGG m7b Created HHFCT_137171_cluster-19031_17_8
hsa-miR-3612 gcaGCCTCCaggtct AGGAGGCA m6b Disrupted HHFCT_137171_cluster-19031_17_8
hsa-miR-3661 gcagcctCCAGGTCt UGACCUGG m7b Disrupted HHFCT_137171_cluster-19031_17_8
hsa-miR-4254 gcagcCTCCAGGtct GCCUGGAG m7b Disrupted HHFCT_137171_cluster-19031_17_8
hsa-miR-4443 gcaGCCTCCAggtct UUGGAGGC m7b Disrupted HHFCT_137171_cluster-19031_17_8
hsa-miR-619-3p gcagccTCCAGGTCt GACCUGGA m8a Disrupted HHFCT_137171_cluster-19031_17_8
hsa-miR-631 gcagcctCCAGGTCt AGACCUGG m7b Disrupted HHFCT_137171_cluster-19031_17_8
hsa-miR-650 gcaGCCTCCaggtct AGGAGGCA m6b Disrupted HHFCT_137171_cluster-19031_17_8
hsa-miR-6511b-5p gcaGCCTGCAGgtct CUGCAGGC m8a Created HHFCT_137171_cluster-19031_17_8
hsa-miR-6811-5p gcaGCCTGCAggtct AUGCAGGC m7b Created HHFCT_137171_cluster-19031_17_8
hsa-miR-6884-5p gCAGCCTCcaggtct AGAGGCUG m7b Disrupted HHFCT_137171_cluster-19031_17_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20649307G>T COSM4895087 TCGA-RP-A693-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p atccgATGCAGattt ACUGCAUU m6b Disrupted HHFKP_126041_cluster-19031_6_8
hsa-miR-3610 aTCCGATTCagattt GAAUCGGA m8a (m7a->m8a) HHFKP_126041_cluster-19031_6_8
hsa-miR-5187-3p atccGATTCAGattt ACUGAAUC m7b Created HHFKP_126041_cluster-19031_6_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20649303C>A COSM4419511 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-3p atgCATCCGatgcag ACGGAUGU m6b Disrupted HHFKP_126041_cluster-19031_6_8
hsa-miR-4502 atgCATCAGatgcag GCUGAUGA m6b Created HHFKP_126041_cluster-19031_6_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser