SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0000571
Gene Symbol: CDC42BPB
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.103012169G>A COSM3706132 HCC141 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p cacaGCTGGTGAaag UCACCAGC m8a Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-197-3p cacagcTGGTGAAag UUCACCAC m7a Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-4661-5p cacAGCTAGTgaaag AACUAGCU m7b Created HHFKP_44591_cluster-7073_14_73
hsa-miR-4733-3p cacagCTGGTGaaag CCACCAGG m6b Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-5096 cacagctGGTGAAAg GUUUCACC m7b Disrupted HHFKP_44591_cluster-7073_14_73

Mutation Mutation ID Sample Name Cancer Type
chr14:g.103012146G>A COSM2025345 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-526b-5p cttcaTCAAGAagac CUCUUGAG m6b Created HHFCT_46639_cluster-7073_30_8
hsa-miR-578 cttcatCAAGAAGac CUUCUUGU m7a Created HHFCT_46639_cluster-7073_30_8
hsa-miR-526b-5p cttcaTCAAGAagac CUCUUGAG m6b Created HHFKP_44591_cluster-7073_14_73
hsa-miR-578 cttcatCAAGAAGac CUUCUUGU m7a Created HHFKP_44591_cluster-7073_14_73

Mutation Mutation ID Sample Name Cancer Type
chr14:g.103012141G>A COSM3493952 TCGA-EE-A2GO-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1264 tcgagAAGACTTtga CAAGUCUU m7b Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-561-3p tcgagaAAACTTTGa CAAAGUUU m8a Created HHFCT_46639_cluster-7073_30_8
hsa-miR-6507-3p tcgagaaGACTTTGa CAAAGUCC m7a Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-6740-3p tcgAGAAGACtttga UGUCUUCU m7b Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-1264 tcgagAAGACTTtga CAAGUCUU m7b Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-561-3p tcgagaAAACTTTGa CAAAGUUU m8a Created HHFKP_44591_cluster-7073_14_73
hsa-miR-6507-3p tcgagaaGACTTTGa CAAAGUCC m7a Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-6740-3p tcgAGAAGACtttga UGUCUUCU m7b Disrupted HHFKP_44591_cluster-7073_14_73

Mutation Mutation ID Sample Name Cancer Type
chr14:g.103012139C>A COSM271015 TCGA-AA-3831-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-3p gagaaGAATTTGaaa CAAAUUCG m7a Created HHFCT_46639_cluster-7073_30_8
hsa-miR-1264 gagAAGACTTtgaaa CAAGUCUU m7b Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-3671 gagaagaATTTGAaa AUCAAAUA m6b Created HHFCT_46639_cluster-7073_30_8
hsa-miR-3973 gagaagACTTTGaaa ACAAAGUA m6b Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-4659a-3p gAGAAGAAtttgaaa UUUCUUCU m7b Created HHFCT_46639_cluster-7073_30_8
hsa-miR-4659b-3p gAGAAGAAtttgaaa UUUCUUCU m7b Created HHFCT_46639_cluster-7073_30_8
hsa-miR-520g-3p gagaagACTTTGaaa ACAAAGUG m6b Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-520h gagaagACTTTGaaa ACAAAGUG m6b Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-607 gagaagaATTTGAAa GUUCAAAU m7b Created HHFCT_46639_cluster-7073_30_8
hsa-miR-6507-3p gagaaGACTTTGaaa CAAAGUCC m7a Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-6740-3p gAGAAGACtttgaaa UGUCUUCU m7b Disrupted HHFCT_46639_cluster-7073_30_8
hsa-miR-10a-3p gagaaGAATTTGaaa CAAAUUCG m7a Created HHFKP_44591_cluster-7073_14_73
hsa-miR-1264 gagAAGACTTtgaaa CAAGUCUU m7b Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-3671 gagaagaATTTGAaa AUCAAAUA m6b Created HHFKP_44591_cluster-7073_14_73
hsa-miR-3973 gagaagACTTTGaaa ACAAAGUA m6b Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-4659a-3p gAGAAGAAtttgaaa UUUCUUCU m7b Created HHFKP_44591_cluster-7073_14_73
hsa-miR-4659b-3p gAGAAGAAtttgaaa UUUCUUCU m7b Created HHFKP_44591_cluster-7073_14_73
hsa-miR-520g-3p gagaagACTTTGaaa ACAAAGUG m6b Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-520h gagaagACTTTGaaa ACAAAGUG m6b Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-607 gagaagaATTTGAAa GUUCAAAU m7b Created HHFKP_44591_cluster-7073_14_73
hsa-miR-6507-3p gagaaGACTTTGaaa CAAAGUCC m7a Disrupted HHFKP_44591_cluster-7073_14_73
hsa-miR-6740-3p gAGAAGACtttgaaa UGUCUUCU m7b Disrupted HHFKP_44591_cluster-7073_14_73

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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