SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001256047
Gene Symbol: C19orf12
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.29708380C>T COSM1392394 TCGA-D5-6540-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5003-5p gaagcTGTTGTGctc UCACAACA m7b Created HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-646 gaAGCTGCTgtgctc AAGCAGCU m7b (m7b->m6b) HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-5003-5p gaagcTGTTGTGctc UCACAACA m7b Created HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-646 gaAGCTGCTgtgctc AAGCAGCU m7b (m7b->m6b) HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29708372C>T COSM4507919 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 tgtgcTCTCTTTCtg GAAAGAGA m8a Created HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-5681a tgtgctCCCTTTCTg AGAAAGGG m8a Disrupted HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-4311 tgtgcTCTCTTTCtg GAAAGAGA m8a Created HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-5681a tgtgctCCCTTTCTg AGAAAGGG m8a Disrupted HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29708370T>A COSM4572546 CSCC-56-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5681a tgctCCCTTTCTggg AGAAAGGG m8a Disrupted HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-6871-5p tgCTCCCATtctggg CAUGGGAG m7b (m6b->m7b) HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-5681a tgctCCCTTTCTggg AGAAAGGG m8a Disrupted HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-6871-5p tgCTCCCATtctggg CAUGGGAG m7b (m6b->m7b) HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29708354G>A COSM1148146 TCGA-34-2600-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p agagGAAAATGaagg ACAUUUUC m7b Created HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-141-5p agaGGAAGATGaagg CAUCUUCC m8a Disrupted HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-153-5p agaggAAAATGAagg UCAUUUUU m7a Created HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-452-3p agaggaAGATGAagg CUCAUCUG m6b Disrupted HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-5696 agaggaAAATGAagg CUCAUUUA m6b Created HHHNE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-1250-3p agagGAAAATGaagg ACAUUUUC m7b Created HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-141-5p agaGGAAGATGaagg CAUCUUCC m8a Disrupted HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-153-5p agaggAAAATGAagg UCAUUUUU m7a Created HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-452-3p agaggaAGATGAagg CUCAUCUG m6b Disrupted HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817
hsa-miR-5696 agaggaAAATGAagg CUCAUUUA m6b Created HHHSE_2403_C19orf12|NM_001256047|exon_CDS|-4.06482115456557|0.988119477832817

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29702967C>T COSM1153356 TCGA-D1-A101-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196b-3p ggGCTGTCGgggggc UCGACAGC m7b (m7b->m6b) HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-6793-3p gggctGTTGGGGggc UCCCCAAC m7b Created HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-196b-3p ggGCTGTCGgggggc UCGACAGC m7b (m7b->m6b) HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-6793-3p gggctGTTGGGGggc UCCCCAAC m7b Created HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29702949C>A COSM1136163 TCGA-CJ-5683-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4269 tagGTGCCTGgatga GCAGGCAC m7b Disrupted HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4645-5p taggTGCCTGGatga ACCAGGCA m7b Disrupted HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4673 taggTGCCTGGAtga UCCAGGCA m8a Disrupted HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-500a-3p tAGGTGCATggatga AUGCACCU m8a (m7a->m8a) HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-501-3p taGGTGCATggatga AAUGCACC m7b (m6b->m7b) HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-502-3p taGGTGCATggatga AAUGCACC m7b (m6b->m7b) HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-5581-3p taggtGCATGGAtga UUCCAUGC m7b Created HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-6715b-5p tagGTGCCTGgatga ACAGGCAC m7b Disrupted HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-6872-3p taggtGCATGGatga CCCAUGCC m6b Created HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4269 tagGTGCCTGgatga GCAGGCAC m7b Disrupted HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4645-5p taggTGCCTGGatga ACCAGGCA m7b Disrupted HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4673 taggTGCCTGGAtga UCCAGGCA m8a Disrupted HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-500a-3p tAGGTGCATggatga AUGCACCU m8a (m7a->m8a) HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-501-3p taGGTGCATggatga AAUGCACC m7b (m6b->m7b) HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-502-3p taGGTGCATggatga AAUGCACC m7b (m6b->m7b) HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-5581-3p taggtGCATGGAtga UUCCAUGC m7b Created HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-6715b-5p tagGTGCCTGgatga ACAGGCAC m7b Disrupted HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-6872-3p taggtGCATGGatga CCCAUGCC m6b Created HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29702934A>G COSM3937995 ESCC-184T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4436b-5p cAAGTGGACagttta GUCCACUU m8a (m8a->m7a) HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548av-3p caagtggGCAGTTTa AAAACUGC m7b Created HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548g-3p caagtggACAGTTTa AAAACUGU m7b Disrupted HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4436b-5p cAAGTGGACagttta GUCCACUU m8a (m8a->m7a) HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548av-3p caagtggGCAGTTTa AAAACUGC m7b Created HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548g-3p caagtggACAGTTTa AAAACUGU m7b Disrupted HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4436b-5p cAAGTGGACagttta GUCCACUU m8a (m8a->m7a) HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548av-3p caagtggGCAGTTTa AAAACUGC m7b Created HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548g-3p caagtggACAGTTTa AAAACUGU m7b Disrupted HHHNE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-4436b-5p cAAGTGGACagttta GUCCACUU m8a (m8a->m7a) HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548av-3p caagtggGCAGTTTa AAAACUGC m7b Created HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891
hsa-miR-548g-3p caagtggACAGTTTa AAAACUGU m7b Disrupted HHHSE_2402_C19orf12|NM_001031726|exon_CDS|-4.13809881050177|-1.92529291943891

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29702895C>T COSM4484113 CSCC-52-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-5p agctgccCCCTGCCg UGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-1827 agCTGCCTCctgccg UGAGGCAG m7b (m6b->m7b) HHFKP_70438_cluster-12256_13_19
hsa-miR-1909-3p agctgcCCCCTGCcg CGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-3612 agcTGCCTCCTgccg AGGAGGCA m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4459 agctgCCTCCTGccg CCAGGAGG m7b Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4695-5p agctGCCTCCTGccg CAGGAGGC m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4722-5p agctgcCTCCTGCCg GGCAGGAG m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4763-3p agctgccCCCTGCCg AGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-486-3p agCTGCCCCctgccg CGGGGCAG m7b (m7b->m6b) HHFKP_70438_cluster-12256_13_19
hsa-miR-650 agcTGCCTCCTgccg AGGAGGCA m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-6722-3p agctgcCCCCTGCcg UGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6798-5p agctgCCCCCTGccg CCAGGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6805-5p agctGCCCCCTgccg UAGGGGGC m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-1207-5p agctgccCCCTGCCg UGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-1827 agCTGCCTCctgccg UGAGGCAG m7b (m6b->m7b) HHFKP_70438_cluster-12256_13_19
hsa-miR-1909-3p agctgcCCCCTGCcg CGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-3612 agcTGCCTCCTgccg AGGAGGCA m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4459 agctgCCTCCTGccg CCAGGAGG m7b Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4695-5p agctGCCTCCTGccg CAGGAGGC m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4722-5p agctgcCTCCTGCCg GGCAGGAG m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4763-3p agctgccCCCTGCCg AGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-486-3p agCTGCCCCctgccg CGGGGCAG m7b (m7b->m6b) HHFKP_70438_cluster-12256_13_19
hsa-miR-650 agcTGCCTCCTgccg AGGAGGCA m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-6722-3p agctgcCCCCTGCcg UGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6798-5p agctgCCCCCTGccg CCAGGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6805-5p agctGCCCCCTgccg UAGGGGGC m7b Disrupted HHFKP_70438_cluster-12256_13_19

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29702892CT>T COSM4746876 pfg127T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-5p ctgccCCCTGCCgagc UGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-1909-3p ctgcCCCCTGCcgagc CGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-4688 cTGCCCCTgccgagc UAGGGGCA m7b Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4763-3p ctgccCCCTGCCgagc AGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6722-3p ctgcCCCCTGCcgagc UGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6743-5p cTGCCCCTgccgagc AAGGGGCA m7b Created HHFKP_70438_cluster-12256_13_19
hsa-miR-6798-5p ctgCCCCCTGccgagc CCAGGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6805-5p ctGCCCCCTgccgagc UAGGGGGC m7b (m7b->m6b) HHFKP_70438_cluster-12256_13_19
hsa-miR-1207-5p ctgccCCCTGCCgagc UGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-1909-3p ctgcCCCCTGCcgagc CGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-4688 cTGCCCCTgccgagc UAGGGGCA m7b Created HHFKP_70438_cluster-12256_13_19
hsa-miR-4763-3p ctgccCCCTGCCgagc AGGCAGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6722-3p ctgcCCCCTGCcgagc UGCAGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6743-5p cTGCCCCTgccgagc AAGGGGCA m7b Created HHFKP_70438_cluster-12256_13_19
hsa-miR-6798-5p ctgCCCCCTGccgagc CCAGGGGG m7b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-6805-5p ctGCCCCCTgccgagc UAGGGGGC m7b (m7b->m6b) HHFKP_70438_cluster-12256_13_19

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29702888G>A COSM1198296 587278 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-5p CCCTGCCAagcaaca UGGCAGGG m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-423-3p ccctgCCGAGCaaca AGCUCGGU m6b Disrupted HHFKP_70438_cluster-12256_13_19
hsa-miR-1207-5p CCCTGCCAagcaaca UGGCAGGG m8a Created HHFKP_70438_cluster-12256_13_19
hsa-miR-423-3p ccctgCCGAGCaaca AGCUCGGU m6b Disrupted HHFKP_70438_cluster-12256_13_19

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29702628C>T COSN5268516 SNUH_G17_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-3p agccCAGTGGatgcc ACCACUGC m6b Created HHFKP_70436_cluster-12256_11_17
hsa-miR-181a-2-3p agccCAGTGGatgcc ACCACUGA m6b Created HHFKP_70436_cluster-12256_11_17
hsa-miR-6509-3p agccCAGTGGAtgcc UUCCACUG m7b Created HHFKP_70436_cluster-12256_11_17
hsa-miR-1273g-3p agccCAGTGGatgcc ACCACUGC m6b Created HHHNA_12195_C19orf12|NM_001031726|exon_utr3|-3.06305800598083|-1.22895013254382
hsa-miR-181a-2-3p agccCAGTGGatgcc ACCACUGA m6b Created HHHNA_12195_C19orf12|NM_001031726|exon_utr3|-3.06305800598083|-1.22895013254382
hsa-miR-6509-3p agccCAGTGGAtgcc UUCCACUG m7b Created HHHNA_12195_C19orf12|NM_001031726|exon_utr3|-3.06305800598083|-1.22895013254382
hsa-miR-1273g-3p agccCAGTGGatgcc ACCACUGC m6b Created HHHSA_12195_C19orf12|NM_001031726|exon_utr3|-3.06305800598083|-1.22895013254382
hsa-miR-181a-2-3p agccCAGTGGatgcc ACCACUGA m6b Created HHHSA_12195_C19orf12|NM_001031726|exon_utr3|-3.06305800598083|-1.22895013254382
hsa-miR-6509-3p agccCAGTGGAtgcc UUCCACUG m7b Created HHHSA_12195_C19orf12|NM_001031726|exon_utr3|-3.06305800598083|-1.22895013254382

Mutation Mutation ID Sample Name Cancer Type
chr19:g.29701734C>T COSN1765035 RK066_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 agactTGTCTGatgc CCAGACAG m6b Created HHFKP_70431_cluster-12256_5_13
hsa-miR-4269 agactTGCCTGatgc GCAGGCAC m6b Disrupted HHFKP_70431_cluster-12256_5_13
hsa-miR-4514 agactTGCCTGatgc ACAGGCAG m6b Disrupted HHFKP_70431_cluster-12256_5_13
hsa-miR-4742-5p agacTTGCCTGAtgc UCAGGCAA m8a Disrupted HHFKP_70431_cluster-12256_5_13
hsa-miR-6715b-5p agactTGCCTGatgc ACAGGCAC m6b Disrupted HHFKP_70431_cluster-12256_5_13
hsa-miR-6882-5p aGACTTGTctgatgc UACAAGUC m7b Created HHFKP_70431_cluster-12256_5_13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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