SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0025060
Gene Symbol: C12orf5
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.4337126A>G COSM4041879 TCGA-F1-A448-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4422 tttactcATGCTTTc AAAAGCAU m7b Disrupted HHFKP_34569_uc001qmp.1_1_11
hsa-miR-6835-3p tttactcGTGCTTTc AAAAGCAC m7b Created HHFKP_34569_uc001qmp.1_1_11

Mutation Mutation ID Sample Name Cancer Type
chr12:g.4337118G>C COSM2067323 SW948 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p atgtGAACTTTactc AAAGUUCU m7a Created HHFCT_36033_uc001qmp.1_1_9
hsa-miR-548at-5p atgtgAACTTTactc AAAAGUUA m6b Created HHFCT_36033_uc001qmp.1_1_9
hsa-miR-561-3p atgtgAACTTTactc CAAAGUUU m6b Created HHFCT_36033_uc001qmp.1_1_9
hsa-miR-148a-5p atgtGAACTTTactc AAAGUUCU m7a Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-548at-5p atgtgAACTTTactc AAAAGUUA m6b Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-561-3p atgtgAACTTTactc CAAAGUUU m6b Created HHFKP_34569_uc001qmp.1_1_11

Mutation Mutation ID Sample Name Cancer Type
chr12:g.4337099T>C COSM228567 ME043T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5680 gctggtaCATTTCTg GAGAAAUG m7b Created HHFKP_34569_uc001qmp.1_1_11

Mutation Mutation ID Sample Name Cancer Type
chr12:g.4337092G>C COSM394410 LUAD-FH5PJ [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1911-3p agcagctCCTGGTat CACCAGGC m6b Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-28-5p agcAGCTCCTggtat AAGGAGCU m7b Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-3139 agcAGCTCCTggtat UAGGAGCU m7b Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-4530 agcagCTGCTGGtat CCCAGCAG m7b Disrupted HHFKP_34569_uc001qmp.1_1_11
hsa-miR-558 aGCAGCTCctggtat UGAGCUGC m7b Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-634 agcagcTGCTGGTat AACCAGCA m7b Disrupted HHFKP_34569_uc001qmp.1_1_11
hsa-miR-646 agcAGCTGCTggtat AAGCAGCU m7b Disrupted HHFKP_34569_uc001qmp.1_1_11
hsa-miR-665 agcagCTCCTGGTat ACCAGGAG m8a Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-6753-5p agcagctCCTGGTat CACCAGGG m6b Created HHFKP_34569_uc001qmp.1_1_11
hsa-miR-708-5p agcAGCTCCTggtat AAGGAGCU m7b Created HHFKP_34569_uc001qmp.1_1_11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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